RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 OMGP23515 440 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 FPR3P25089 353 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 CRABP1P29762 137 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 PITPNBP48739 271 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 SLC7A2P52569 658 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 MEP1BQ16820 701 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 ZNF404Q494X3 552 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 FAM201AQ5SY85 155 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 C16orf87Q6PH81 154 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 C9orf139Q6ZV77 190 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 PTCHD4Q6ZW05 846 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 SLC15A3Q8IY34 581 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 RP9Q8TA86 221 aaKnown RBP11.08□□□□□ -0.64
VCL-205ENST00000478896 GPX7Q96SL4 187 aaPredicted RBP11.08□□□□□ -0.64
VCL-205ENST00000478896 COQ7Q99807 217 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 SLC30A2Q9BRI3 323 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 NUDT16L1Q9BRJ7 211 aaKnown RBP11.08□□□□□ -0.64
VCL-205ENST00000478896 TNFRSF19Q9NS68 423 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 TMEM100Q9NV29 134 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 CLN8Q9UBY8 286 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 SOX21Q9Y651 276 aaPredicted RBP11.08□□□□□ -0.64
VCL-205ENST00000478896 ENPP4Q9Y6X5 453 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 SLC22A2O15244 555 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 HOXA3O43365 443 aaPredicted RBP11.07□□□□□ -0.64
VCL-205ENST00000478896 HLA-DPB1P04440 258 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 CRYBA1P05813 215 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 PRSS12P56730 875 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 PAX2Q02962 417 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 ZNF181Q2M3W8 571 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 GPR157Q5UAW9 335 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 CGB2Q6NT52 195 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 CORO6Q6QEF8 472 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 BRD3OSQ6XYD6 125 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 DPY19L2P2Q6ZN68 376 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 OR10S1Q8NGN2 331 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 OR11L1Q8NGX0 322 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 TMIGD2Q96BF3 282 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 TSSK2Q96PF2 358 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 SLITRK2Q9H156 845 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 KIF17Q9P2E2 1029 aa11.07□□□□□ -0.64
VCL-205ENST00000478896 A0A1W2PRQ8 180 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 UNC119BA6NIH7 251 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 F5H5K5 113 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 NME4O00746 187 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 PHYHO14832 338 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 PTP4A3O75365 173 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 PPP1R3DO95685 299 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 RENP00797 406 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 KNG1P01042 644 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 NCK1P16333 377 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 CDKN2AP42771 156 aaKnown RBP11.06□□□□□ -0.64
VCL-205ENST00000478896 OMPP47874 163 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 RAD23AP54725 363 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 FGF12P61328 243 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 DEFA6Q01524 100 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 MALLQ13021 153 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 DGCR6Q14129 220 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 KCNMB1Q16558 191 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 DEFB112Q30KQ8 113 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 C17orf107Q6ZR85 190 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 DCDC5Q6ZRR9 648 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 LINC00346Q8IVM7 164 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 C19orf18Q8NEA5 215 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 FANK1Q8TC84 345 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 TECTBQ96PL2 329 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 ERMAPQ96PL5 475 aaPredicted RBP11.06□□□□□ -0.64
VCL-205ENST00000478896 HOPXQ9BPY8 73 aaPredicted RBP11.06□□□□□ -0.64
VCL-205ENST00000478896 KCTD14Q9BQ13 255 aaPredicted RBP11.06□□□□□ -0.64
VCL-205ENST00000478896 CDADC1Q9BWV3 514 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 MMADHCQ9H3L0 296 aaPredicted RBP11.06□□□□□ -0.64
VCL-205ENST00000478896 LHFPL6Q9Y693 200 aa11.06□□□□□ -0.64
VCL-205ENST00000478896 TENM1Q9UKZ4 2725 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 TRBV4-1A0A0J9YWV2 114 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 KIR2DS1A0A191URI9 304 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 DCTN6O00399 190 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 NDUFAB1O14561 156 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 ENSAO43768 121 aaKnown RBP11.05□□□□□ -0.64
VCL-205ENST00000478896 HLA-DQA2P01906 255 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 COX4I1P13073 169 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 RHCEP18577 417 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 NOS3P29474 1203 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 GATA4P43694 442 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 GSK3BP49841 420 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 NUDT2P50583 147 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 COX10Q12887 443 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 KRT72Q14CN4 511 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 PDLIM3Q53GG5 364 aaPredicted RBP11.05□□□□□ -0.64
VCL-205ENST00000478896 PRAMEF6Q5VXH4 476 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 WDR25Q64LD2 544 aaPredicted RBP11.05□□□□□ -0.64
VCL-205ENST00000478896 SMARCD3Q6STE5 483 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 LYPD2Q6UXB3 125 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 CFAP77Q6ZQR2 320 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 MRPL21Q7Z2W9 205 aaKnown RBP11.05□□□□□ -0.64
VCL-205ENST00000478896 FITM2Q8N6M3 262 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 OR2AJ1Q8NGZ0 328 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 OR52J3Q8NH60 311 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 SPRYD4Q8WW59 207 aaPredicted RBP11.05□□□□□ -0.64
VCL-205ENST00000478896 ERGIC1Q969X5 290 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 PITX2Q99697 317 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 ATF6BQ99941 703 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms