RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TRIM64A6NGJ6 449 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 APOC1P02654 83 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 TACSTD2P09758 323 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 ACSM4P0C7M7 580 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 CX3CR1P49238 355 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 OR12D2P58182 307 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 BSPH1Q075Z2 132 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 IRF3Q14653 427 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 BEX5Q5H9J7 111 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 OR2G6Q5TZ20 316 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 ZNF773Q6PK81 442 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 KCTD20Q7Z5Y7 419 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 PAQR4Q8N4S7 273 aaPredicted RBP14.02□□□□□ -0.17
VHL-203ENST00000477538 NANOGP1Q8N7R0 232 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 OR52N1Q8NH53 320 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 PLPPR2Q96GM1 343 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 DCLRE1CQ96SD1 692 aaKnown RBP14.02□□□□□ -0.17
VHL-203ENST00000477538 MND1Q9BWT6 205 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 ESRP2Q9H6T0 727 aaKnown RBP14.02□□□□□ -0.17
VHL-203ENST00000477538 ZNF696Q9H7X3 374 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 ISG20L2Q9H9L3 353 aaKnown RBP14.02□□□□□ -0.17
VHL-203ENST00000477538 SLC24A3Q9HC58 644 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 ACOXLQ9NUZ1 547 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 GRIP1Q9Y3R0 1128 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 SNX5Q9Y5X3 404 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 USP9YO00507 2555 aaPredicted RBP14.02□□□□□ -0.17
VHL-203ENST00000477538 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.01□□□□□ -0.17
VHL-203ENST00000477538 RPP14O95059 124 aaKnown RBP14.01□□□□□ -0.17
VHL-203ENST00000477538 CRYAAP02489 173 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 MT-ND5P03915 603 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 ZNF35P13682 527 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 CALCRP30988 508 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 DCTDP32321 178 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 SLC6A9P48067 706 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 PSMA6P60900 246 aaKnown RBP14.01□□□□□ -0.17
VHL-203ENST00000477538 HGFACQ04756 655 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 SPOCK1Q08629 439 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 ZNF829Q3KNS6 432 aaPredicted RBP14.01□□□□□ -0.17
VHL-203ENST00000477538 NCMAPQ5T1S8 102 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 LIPNQ5VXI9 398 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 DRAM2Q6UX65 266 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 EGFL6Q8IUX8 553 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 SPRYD4Q8WW59 207 aaPredicted RBP14.01□□□□□ -0.17
VHL-203ENST00000477538 DOK1Q99704 481 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 SPOCK3Q9BQ16 436 aa14.01□□□□□ -0.17
VHL-203ENST00000477538 DEFB108AA8MXU0 73 aa14□□□□□ -0.17
VHL-203ENST00000477538 ABCD4O14678 606 aa14□□□□□ -0.17
VHL-203ENST00000477538 SIAH2O43255 324 aa14□□□□□ -0.17
VHL-203ENST00000477538 PSMB10P40306 273 aa14□□□□□ -0.17
VHL-203ENST00000477538 WNT5AP41221 380 aa14□□□□□ -0.17
VHL-203ENST00000477538 MAP2K4P45985 399 aa14□□□□□ -0.17
VHL-203ENST00000477538 NR1H2P55055 460 aa14□□□□□ -0.17
VHL-203ENST00000477538 WNT4P56705 351 aa14□□□□□ -0.17
VHL-203ENST00000477538 ZNF121P58317 390 aaPredicted RBP14□□□□□ -0.17
VHL-203ENST00000477538 TBCEQ15813 527 aaPredicted RBP14□□□□□ -0.17
VHL-203ENST00000477538 NAA40Q86UY6 237 aa14□□□□□ -0.17
VHL-203ENST00000477538 SVOPQ8N4V2 548 aa14□□□□□ -0.17
VHL-203ENST00000477538 PELI1Q96FA3 418 aa14□□□□□ -0.17
VHL-203ENST00000477538 C4orf45Q96LM5 186 aa14□□□□□ -0.17
VHL-203ENST00000477538 BRD7Q9NPI1 651 aa14□□□□□ -0.17
VHL-203ENST00000477538 TMEM269A0A1B0GVZ9 245 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 ATP6V1G2-DDX39BF2Z307 99 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 SRSF10O75494 262 aaKnown RBP13.99□□□□□ -0.17
VHL-203ENST00000477538 ANXA2P07355 339 aaKnown RBP13.99□□□□□ -0.17
VHL-203ENST00000477538 CD3EP07766 207 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 SLC2A1P11166 492 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 RGS6P49758 472 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 MMP16P51512 607 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 GBX2P52951 348 aaPredicted RBP13.99□□□□□ -0.17
VHL-203ENST00000477538 MFGE8Q08431 387 aaPredicted RBP13.99□□□□□ -0.17
VHL-203ENST00000477538 ARL9Q6T311 187 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 SPARTQ8N0X7 666 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 ZNF485Q8NCK3 441 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 TSPAN14Q8NG11 270 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 GATAD2BQ8WXI9 593 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 RORBQ92753 470 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 PIK3IP1Q96FE7 263 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 RADILQ96JH8 1075 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 OR51B6Q9H340 312 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 FAM206AQ9NX38 181 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 EIF3KQ9UBQ5 218 aaKnown RBP13.99□□□□□ -0.17
VHL-203ENST00000477538 KCNN3Q9UGI6 736 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 GTF2A1LQ9UNN4 478 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 LSM2Q9Y333 95 aaKnown RBP13.99□□□□□ -0.17
VHL-203ENST00000477538 N6AMT1Q9Y5N5 214 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 R4GMQ9 66 aa13.99□□□□□ -0.17
VHL-203ENST00000477538 RAI1Q7Z5J4 1906 aaPredicted RBP13.99□□□□□ -0.17
VHL-203ENST00000477538 UTP20O75691 2785 aaKnown RBP13.99□□□□□ -0.17
VHL-203ENST00000477538 A0A087WXM4 84 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 LOC110117498-PIK3R3F6TDL0 507 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 ICMTO60725 284 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 PNPP00491 289 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 LCATP04180 440 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 FAM157BP0CG42 384 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 PCSK6P29122 969 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 EMX1Q04741 257 aaPredicted RBP13.98□□□□□ -0.17
VHL-203ENST00000477538 MRPL28Q13084 256 aaKnown RBP13.98□□□□□ -0.17
VHL-203ENST00000477538 DAZAP2Q15038 168 aaPredicted RBP13.98□□□□□ -0.17
VHL-203ENST00000477538 SPHARQ15513 63 aa13.98□□□□□ -0.17
VHL-203ENST00000477538 SP5Q6BEB4 398 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms