RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 C15orf40Q8WUR7 153 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 EDA2RQ9HAV5 297 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 FAM49BQ9NUQ9 324 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 PSG11Q9UQ72 335 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 A0A0U1RQV1 116 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 GABRR3A8MPY1 467 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 NVLO15381 856 aaKnown RBP3.62□□□□□ -1.83
VPS50-212ENST00000476413 SPAG7O75391 227 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 KRT16P08779 473 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 PGA4P0DJD7 388 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 PGA3P0DJD8 388 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 SSTR5P35346 364 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 LONP1P36776 959 aaKnown RBP3.62□□□□□ -1.83
VPS50-212ENST00000476413 PEX19P40855 299 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 RPS23P62266 143 aaKnown RBP3.62□□□□□ -1.83
VPS50-212ENST00000476413 LOXL1Q08397 574 aaPredicted RBP3.62□□□□□ -1.83
VPS50-212ENST00000476413 EBI3Q14213 229 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 ZNF266Q14584 549 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 KIR2DS1Q14954 304 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 IRF4Q15306 451 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 ORMDL2Q53FV1 153 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 AVPI1Q5T686 147 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 CBR4Q8N4T8 237 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 COX18Q8N8Q8 333 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 FAM184AQ8NB25 1140 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 PROKR2Q8NFJ6 384 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 OR10W1Q8NGF6 305 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 OR6Q1Q8NGQ2 317 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 CA5BP1Q8WTZ4 195 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 RGP1Q92546 391 aaPredicted RBP3.62□□□□□ -1.83
VPS50-212ENST00000476413 NAT6Q93015 286 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 DYNLL2Q96FJ2 89 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 PDXPQ96GD0 296 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 SDHCQ99643 169 aaPredicted RBP3.62□□□□□ -1.83
VPS50-212ENST00000476413 UQCC2Q9BRT2 126 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 VCXQ9H320 206 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 SLC39A1Q9NY26 324 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 SLC17A7Q9P2U7 560 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 CHTOPQ9Y3Y2 248 aaKnown RBP3.62□□□□□ -1.83
VPS50-212ENST00000476413 PALLDQ8WX93 1383 aa3.62□□□□□ -1.83
VPS50-212ENST00000476413 FHOD3Q2V2M9 1422 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 A0A0J9YXV3 536 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 DNASE2O00115 360 aaPredicted RBP3.61□□□□□ -1.83
VPS50-212ENST00000476413 NMT2O60551 498 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 SLC25A14O95258 325 aaPredicted RBP3.61□□□□□ -1.83
VPS50-212ENST00000476413 IL32P24001 234 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 SYNJ2BPP57105 145 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 LRRC63Q05C16 580 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 PTGES3Q15185 160 aaKnown RBP3.61□□□□□ -1.83
VPS50-212ENST00000476413 ZNF691Q5VV52 312 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 Q5W150 140 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 ANGPTL8Q6UXH0 198 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 WDR86Q86TI4 376 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 VKORC1L1Q8N0U8 176 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 INO80EQ8NBZ0 244 aaPredicted RBP3.61□□□□□ -1.83
VPS50-212ENST00000476413 OR11H7Q8NGC8 314 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 APH1AQ96BI3 265 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 NEURL3Q96EH8 262 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 CERS2Q96G23 380 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 CSPG4P5Q96PW8 444 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 TIMM17AQ99595 171 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 SAMD10Q9BYL1 202 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 RGCCQ9H4X1 137 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 CD209Q9NNX6 404 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 CTSFQ9UBX1 484 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 TRMT112Q9UI30 125 aaKnown RBP3.61□□□□□ -1.83
VPS50-212ENST00000476413 ARID1AO14497 2285 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 ADGRA3Q8IWK6 1321 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 PCDH11XQ9BZA7 1347 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 IGSF9BQ9UPX0 1349 aa3.61□□□□□ -1.83
VPS50-212ENST00000476413 PLPP1O14494 284 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 TRDMT1O14717 391 aaKnown RBP3.6□□□□□ -1.83
VPS50-212ENST00000476413 ZNF207O43670 478 aaKnown RBP3.6□□□□□ -1.83
VPS50-212ENST00000476413 TDP2O95551 362 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 IGFBP3P17936 291 aaPredicted RBP3.6□□□□□ -1.83
VPS50-212ENST00000476413 BMI1P35226 326 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 DNAJC3Q13217 504 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 SLAQ13239 276 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 DGCR6Q14129 220 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 UBE2SQ16763 222 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 TFDP3Q5H9I0 405 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 H3F3CQ6NXT2 135 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 PRMT9Q6P2P2 845 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 WDR82Q6UXN9 313 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 MRPL21Q7Z2W9 205 aaKnown RBP3.6□□□□□ -1.83
VPS50-212ENST00000476413 ZNF547Q8IVP9 402 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 RIMKLAQ8IXN7 391 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 PRSS58Q8IYP2 241 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 SNX31Q8N9S9 440 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 TOP1MTQ969P6 601 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 KIAA1143Q96AT1 154 aaPredicted RBP3.6□□□□□ -1.83
VPS50-212ENST00000476413 DCPSQ96C86 337 aaKnown RBP3.6□□□□□ -1.83
VPS50-212ENST00000476413 DEFB129Q9H1M3 183 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 MYOZ2Q9NPC6 264 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 COMMD3-BMI1R4GMX3 469 aa3.6□□□□□ -1.83
VPS50-212ENST00000476413 A0A1W2PP18 115 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 OR6C74A6NCV1 312 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 H0YC42 278 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms