RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 GPR151Q8TDV0 419 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 CHAC1Q9BUX1 264 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 PKIBQ9C010 78 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 LSM7Q9UK45 103 aaKnown RBP2.91□□□□□ -1.94
PTCD3-211ENST00000476215 HPCAL4Q9UM19 191 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 ING4Q9UNL4 249 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 STARD10Q9Y365 291 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 CSDC2Q9Y534 153 aaKnown RBP2.91□□□□□ -1.94
PTCD3-211ENST00000476215 RFX7Q2KHR2 1363 aa2.9□□□□□ -1.94
PTCD3-211ENST00000476215 LRCOL1A6NCL2 159 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 CDC7O00311 574 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 B4GALT5O43286 388 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 EEDO75530 441 aaKnown RBP2.9□□□□□ -1.95
PTCD3-211ENST00000476215 RAB3DO95716 219 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 CLIC3O95833 236 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 MRPL3P09001 348 aaKnown RBP2.9□□□□□ -1.95
PTCD3-211ENST00000476215 MAS1LP35410 378 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 SSR4P51571 173 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 TWF1Q12792 350 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 PPP1R7Q15435 360 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 LY6G6FQ5SQ64 297 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 CCNJQ5T5M9 372 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 ANKRD22Q5VYY1 191 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 NANOGP8Q6NSW7 305 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 TEX43Q6ZNM6 134 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 Q6ZR03 302 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 HDDC2Q7Z4H3 204 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 FAM228AQ86W67 206 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 SLC22A9Q8IVM8 553 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 LIX1Q8N485 282 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 AKR7LQ8NHP1 331 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 UBALD1Q8TB05 177 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 SLC2A14Q8TDB8 520 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 CREB3L1Q96BA8 519 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 ISYNA1Q9NPH2 558 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 KCNJ16Q9NPI9 418 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 PSG8Q9UQ74 426 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 YTHDF2Q9Y5A9 579 aaKnown RBP2.9□□□□□ -1.95
PTCD3-211ENST00000476215 ZBED9Q6R2W3 1325 aa2.9□□□□□ -1.95
PTCD3-211ENST00000476215 A0A1B0GUL6 1792 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 AK9Q5TCS8 1911 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 ECM29Q5VYK3 1845 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 COL6A3P12111 3177 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 IGHV3-74A0A0B4J1X5 117 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 ZNF816-ZNF321PA0A0X1KG74 233 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 A0A1B0GVX0 72 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 SPECC1L-ADORA2AF8WAN1 911 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 HMMRO75330 724 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 CNMDO75829 334 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 RHOXF2BP0C7M4 288 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 CEACAM6P40199 344 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 CCNHP51946 323 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-211ENST00000476215 MAB21L1Q13394 359 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 SPECC1LQ69YQ0 1117 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 DUX4L9Q6RFH8 374 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-211ENST00000476215 CDR2LQ86X02 465 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-211ENST00000476215 C15orf56Q8N910 161 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 SLC7A13Q8TCU3 470 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 CCDC126Q96EE4 140 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 PDXPQ96GD0 296 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 TPD52L3Q96J77 140 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 PKNOX2Q96KN3 472 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 SERPINB12Q96P63 405 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 ATP5SQ99766 215 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 SLC25A2Q9BXI2 301 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 CHMP4BQ9H444 224 aaKnown RBP2.89□□□□□ -1.95
PTCD3-211ENST00000476215 RPP21Q9H633 154 aaKnown RBP2.89□□□□□ -1.95
PTCD3-211ENST00000476215 ZNF430Q9H8G1 570 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-211ENST00000476215 ZNF282Q9UDV7 671 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-211ENST00000476215 DDX19BQ9UMR2 479 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 GOLT1BQ9Y3E0 138 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 CUL9Q8IWT3 2517 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 MYH2Q9UKX2 1941 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 ZNF532Q9HCE3 1301 aa2.89□□□□□ -1.95
PTCD3-211ENST00000476215 PCM1Q15154 2024 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 MYH13Q9UKX3 1938 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 DPM1O60762 260 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 SLC25A14O95258 325 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-211ENST00000476215 ZNF43P17038 809 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 NSG1P42857 185 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 NAMPTP43490 491 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 CSNK1A1P48729 337 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 CCNA1P78396 465 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 PTPN20Q4JDL3 420 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 DNAJC24Q6P3W2 148 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 FAM43BQ6ZT52 329 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-211ENST00000476215 TAS2R42Q7RTR8 314 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 BIVMQ86UB2 503 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 SYNPRQ8TBG9 265 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 ZNF502Q8TBZ5 544 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 FRZBQ92765 325 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 TM4SF18Q96CE8 201 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 DYNLL2Q96FJ2 89 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 ILKAPQ9H0C8 392 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-211ENST00000476215 PORCNQ9H237 461 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 PRO3102Q9H379 93 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 BOLA2Q9H3K6 86 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 FGF20Q9NP95 211 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-211ENST00000476215 SPTBN5Q9NRC6 3674 aaKnown RBP2.88□□□□□ -1.95
PTCD3-211ENST00000476215 DOCK3Q8IZD9 2030 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms