RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 TMEM150AQ86TG1 271 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 SNX31Q8N9S9 440 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 HSD17B11Q8NBQ5 300 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 NOXO1Q8NFA2 376 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 CT45A3Q8NHU0 189 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 ACER1Q8TDN7 264 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 TFGQ92734 400 aaPredicted RBP3.72□□□□□ -1.81
SMC5-203ENST00000475540 PIK3IP1Q96FE7 263 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 MED8Q96G25 268 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 NAT9Q9BTE0 207 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 RIOK2Q9BVS4 552 aaKnown RBP3.72□□□□□ -1.81
SMC5-203ENST00000475540 CALN1Q9BXU9 219 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 HDHD2Q9H0R4 259 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 C20orf85Q9H1P6 137 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 SYT4Q9H2B2 425 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 TMEM38AQ9H6F2 299 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 CTPS2Q9NRF8 586 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 NRBP2Q9NSY0 501 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 STMN3Q9NZ72 180 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 GGA2Q9UJY4 613 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 V9GYY5 206 aaPredicted RBP3.72□□□□□ -1.81
SMC5-203ENST00000475540 MSH6P52701 1360 aa3.72□□□□□ -1.81
SMC5-203ENST00000475540 A0A096LNJ9 63 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 ZNF816-ZNF321PA0A0X1KG74 233 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 A0A1B0GW55 424 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 A0A1W2PQ67 120 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 ERVV-1B6SEH8 477 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 H3BN98 237 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 CBR3O75828 277 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 TNFSF13O75888 250 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 PLEKHA8P1O95397 391 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 CST4P01036 141 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 RPN2P04844 631 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 CHTF8P0CG12 524 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 DUX4L2P0CJ85 424 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 DUX4L3P0CJ86 424 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 DUX4L5P0CJ88 424 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 DUX4L6P0CJ89 424 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 DUX4L7P0CJ90 424 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 PNMA6AP0CW24 399 aaPredicted RBP3.71□□□□□ -1.82
SMC5-203ENST00000475540 CRATP43155 626 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 SUB1P53999 127 aaKnown RBP eCLIP3.71□□□□□ -1.82
SMC5-203ENST00000475540 ART3Q13508 389 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 CLINT1Q14677 625 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 ATP6AP1Q15904 470 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 ZNF470Q6ECI4 717 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 DUX4L9Q6RFH8 374 aaPredicted RBP3.71□□□□□ -1.82
SMC5-203ENST00000475540 PRSS41Q7RTY9 318 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 RALGPS2Q86X27 583 aaPredicted RBP3.71□□□□□ -1.82
SMC5-203ENST00000475540 VKORC1L1Q8N0U8 176 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 C6orf223Q8N319 242 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 KIF2BQ8N4N8 673 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 OR6K6Q8NGW6 343 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 OR51F2Q8NH61 342 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 TMEM158Q8WZ71 300 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 EEF1AKMT3Q96AZ1 226 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 FOXC2Q99958 501 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 SH3GL3Q99963 347 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 PAIP2Q9BPZ3 127 aaKnown RBP3.71□□□□□ -1.82
SMC5-203ENST00000475540 ULBP2Q9BZM5 246 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 DUX4Q9UBX2 424 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 POFUT2Q9Y2G5 429 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 V9GYY9 64 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 MYO10Q9HD67 2058 aa3.71□□□□□ -1.82
SMC5-203ENST00000475540 PDS5BQ9NTI5 1447 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 SCN2AQ99250 2005 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 LRCOL1A6NCL2 159 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 RBMY1BA6NDE4 496 aaKnown RBP3.7□□□□□ -1.82
SMC5-203ENST00000475540 RBMY1EA6NEQ0 496 aaKnown RBP3.7□□□□□ -1.82
SMC5-203ENST00000475540 SMKR1H3BMG3 65 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 PRMT5O14744 637 aaPredicted RBP3.7□□□□□ -1.82
SMC5-203ENST00000475540 CALUO43852 315 aaPredicted RBP3.7□□□□□ -1.82
SMC5-203ENST00000475540 MOSP00540 346 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 S100A6P06703 90 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 RBMY1DP0C7P1 496 aaKnown RBP3.7□□□□□ -1.82
SMC5-203ENST00000475540 RBMY1A1P0DJD3 496 aaKnown RBP3.7□□□□□ -1.82
SMC5-203ENST00000475540 GFAPP14136 432 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 IL32P24001 234 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 AK4P27144 223 aaPredicted RBP3.7□□□□□ -1.82
SMC5-203ENST00000475540 ARR3P36575 388 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 RORCP51449 518 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 DLX1P56177 255 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 IRX3P78415 501 aaPredicted RBP3.7□□□□□ -1.82
SMC5-203ENST00000475540 SLC25A11Q02978 314 aaKnown RBP3.7□□□□□ -1.82
SMC5-203ENST00000475540 ATP6V1FQ16864 119 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 CNIH2Q6PI25 160 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 VN1R2Q8NFZ6 395 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 OR2A1Q8NGT9 310 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 LGALS14Q8TCE9 139 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 TMEM239Q8WW34 195 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 BAALCQ8WXS3 180 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 NDRG1Q92597 394 aaKnown RBP3.7□□□□□ -1.82
SMC5-203ENST00000475540 CDKL2Q92772 493 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 TMEM54Q969K7 222 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 SERPINB12Q96P63 405 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 LZTS2Q9BRK4 669 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 HDHD3Q9BSH5 251 aaPredicted RBP3.7□□□□□ -1.82
SMC5-203ENST00000475540 FRMD8P1Q9BZ68 369 aaPredicted RBP3.7□□□□□ -1.82
SMC5-203ENST00000475540 ENPP5Q9UJA9 477 aa3.7□□□□□ -1.82
SMC5-203ENST00000475540 TBX21Q9UL17 535 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms