RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 DNAJC24Q6P3W2 148 aa1.93□□□□□ -2.1
LTN1-204ENST00000475344 SSX9Q7RTT3 188 aa1.93□□□□□ -2.1
LTN1-204ENST00000475344 CDKL3Q8IVW4 592 aaPredicted RBP1.93□□□□□ -2.1
LTN1-204ENST00000475344 CHST4Q8NCG5 386 aa1.93□□□□□ -2.1
LTN1-204ENST00000475344 RTN4IP1Q8WWV3 396 aaPredicted RBP1.93□□□□□ -2.1
LTN1-204ENST00000475344 PTX4Q96A99 478 aa1.93□□□□□ -2.1
LTN1-204ENST00000475344 TIMM17AQ99595 171 aa1.93□□□□□ -2.1
LTN1-204ENST00000475344 FAM192AQ9GZU8 254 aa1.93□□□□□ -2.1
LTN1-204ENST00000475344 NEUROG2Q9H2A3 272 aa1.93□□□□□ -2.1
LTN1-204ENST00000475344 TMEM9BQ9NQ34 198 aa1.93□□□□□ -2.1
LTN1-204ENST00000475344 RAB20Q9NX57 234 aa1.93□□□□□ -2.1
LTN1-204ENST00000475344 LYARQ9NX58 379 aaKnown RBP1.93□□□□□ -2.1
LTN1-204ENST00000475344 RABL2BQ9UNT1 228 aa1.93□□□□□ -2.1
LTN1-204ENST00000475344 SLC17A4Q9Y2C5 497 aa1.93□□□□□ -2.1
LTN1-204ENST00000475344 NINLQ9Y2I6 1382 aa1.93□□□□□ -2.1
LTN1-204ENST00000475344 CAMTA1Q9Y6Y1 1673 aa1.93□□□□□ -2.1
LTN1-204ENST00000475344 ANKRD12Q6UB98 2062 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 AHDC1Q5TGY3 1603 aaPredicted RBP1.92□□□□□ -2.1
LTN1-204ENST00000475344 A0A075B6Q4 140 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 SMCO2A6NFE2 343 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 DNASE2O00115 360 aaPredicted RBP1.92□□□□□ -2.1
LTN1-204ENST00000475344 LGALS9O00182 355 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 RAD51CO43502 376 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 CDH16O75309 829 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 CD74P04233 296 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 U2AF2P26368 475 aaKnown RBP eCLIP1.92□□□□□ -2.1
LTN1-204ENST00000475344 OPRK1P41145 380 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 SYKP43405 635 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 CXCL12P48061 93 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 EIF3EP60228 445 aaKnown RBP1.92□□□□□ -2.1
LTN1-204ENST00000475344 PPP1CBP62140 327 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 RPS15P62841 145 aaKnown RBP1.92□□□□□ -2.1
LTN1-204ENST00000475344 CCNA1P78396 465 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 LIPEQ05469 1076 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 TGM3Q08188 693 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 SELENBP1Q13228 472 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 RCN1Q15293 331 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 PSMD5Q16401 504 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 HSP90AB3PQ58FF7 597 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 TCEAL5Q5H9L2 206 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 GPR107Q5VW38 600 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 AP1ARQ63HQ0 302 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 SAXO2Q658L1 398 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 H3F3CQ6NXT2 135 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 SPESP1Q6UW49 350 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 BZW1Q7L1Q6 419 aaKnown RBP1.92□□□□□ -2.1
LTN1-204ENST00000475344 SNX20Q7Z614 316 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 CMTM1Q8IZ96 169 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 OR6Q1Q8NGQ2 317 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 OR8U1Q8NH10 309 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 OR5K2Q8NHB8 316 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 LILRB4Q8NHJ6 448 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 LYPD6BQ8NI32 183 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 FAM81AQ8TBF8 368 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 C17orf50Q8WW18 174 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 CAPSLQ8WWF8 208 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 TCEAL3Q969E4 200 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 FLYWCH2Q96CP2 140 aaKnown RBP1.92□□□□□ -2.1
LTN1-204ENST00000475344 GSDMAQ96QA5 445 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 XPO6Q96QU8 1125 aaKnown RBP1.92□□□□□ -2.1
LTN1-204ENST00000475344 MYCBPQ99417 103 aaPredicted RBP1.92□□□□□ -2.1
LTN1-204ENST00000475344 TEKT3Q9BXF9 490 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 C1orf198Q9H425 327 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 ANKRA2Q9H9E1 313 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 FBXO6Q9NRD1 293 aaPredicted RBP1.92□□□□□ -2.1
LTN1-204ENST00000475344 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 ZNF391Q9UJN7 358 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 SAR1BQ9Y6B6 198 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 ZNF407Q9C0G0 2248 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 NID2Q14112 1375 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 PALLDQ8WX93 1383 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 SEC16AO15027 2179 aa1.92□□□□□ -2.1
LTN1-204ENST00000475344 LSM1O15116 133 aaKnown RBP1.91□□□□□ -2.1
LTN1-204ENST00000475344 ZNF688P0C7X2 276 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 GGT1P19440 569 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 TGFBR1P36897 503 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 TNFSF9P41273 254 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 RAB9AP51151 201 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 ZNF616Q08AN1 781 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 MERTKQ12866 999 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 MRPL23Q16540 153 aaKnown RBP1.91□□□□□ -2.1
LTN1-204ENST00000475344 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 SOHLH1Q5JUK2 328 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 MBOAT1Q6ZNC8 495 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 MBOAT2Q6ZWT7 520 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 SLC16A13Q7RTY0 426 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 LUZP2Q86TE4 346 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 GABRG1Q8N1C3 465 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 CBR4Q8N4T8 237 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 COX18Q8N8Q8 333 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 TTC29Q8NA56 475 aaPredicted RBP1.91□□□□□ -2.1
LTN1-204ENST00000475344 OR4K5Q8NGD3 323 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 OR52E2Q8NGJ4 325 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 OR9A2Q8NGT5 310 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 EEF1AKMT3Q96AZ1 226 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 HSD17B10Q99714 261 aaKnown RBP1.91□□□□□ -2.1
LTN1-204ENST00000475344 ZYG11BQ9C0D3 744 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 SIGLEC9Q9Y336 463 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 FHOD3Q2V2M9 1422 aa1.91□□□□□ -2.1
LTN1-204ENST00000475344 KBTBD11-OT1A0A1B0GTJ5 212 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms