RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 GID4Q8IVV7 300 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 ZNF525Q8N782 197 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 ZNF283Q8N7M2 679 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 BBS1Q8NFJ9 593 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 CMBLQ96DG6 245 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 ZNF799Q96GE5 643 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 C18orf12Q96KH6 178 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 TEAD3Q99594 435 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 TOR3AQ9H497 397 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 MARCH7Q9H992 704 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 DECR2Q9NUI1 292 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 PTTG3PQ9NZH4 202 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 CGGBP1Q9UFW8 167 aaPredicted RBP11.78□□□□□ -0.52
USF1-205ENST00000473969 LAMP5Q9UJQ1 280 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 OTOGQ6ZRI0 2925 aa11.77□□□□□ -0.52
USF1-205ENST00000473969 TRIM64A6NGJ6 449 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 TRIM64BA6NI03 449 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 SLC22A31A6NKX4 558 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 C17orf100A8MU93 164 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 H7C1Q1 480 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 SMAD7O15105 426 aaKnown RBP11.77□□□□□ -0.53
USF1-205ENST00000473969 LY6HO94772 140 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 H2BFMP0C1H6 154 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 DAOP14920 347 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 RAC2P15153 192 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 SELEP16581 610 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 TNFSF4P23510 183 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 EPHA2P29317 976 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 POLR2IP36954 125 aaKnown RBP11.77□□□□□ -0.53
USF1-205ENST00000473969 NAA10P41227 235 aaPredicted RBP11.77□□□□□ -0.53
USF1-205ENST00000473969 ZIK1Q3SY52 487 aaPredicted RBP11.77□□□□□ -0.53
USF1-205ENST00000473969 NXNL2Q5VZ03 156 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 DRAM2Q6UX65 266 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 SLC16A9Q7RTY1 509 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 TIGD4Q8IY51 512 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 ZNF540Q8NDQ6 660 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 OR8J1Q8NGP2 316 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 UBASH3BQ8TF42 649 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 HAVCR1Q96D42 359 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 IL4I1Q96RQ9 567 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 KCNJ15Q99712 375 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 PIMREGQ9BSJ6 248 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 ABHD6Q9BV23 337 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 C1QTNF5Q9BXJ0 243 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 YIPF3Q9GZM5 350 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 PNRC2Q9NPJ4 139 aaKnown RBP11.77□□□□□ -0.53
USF1-205ENST00000473969 DDX28Q9NUL7 540 aaKnown RBP11.77□□□□□ -0.53
USF1-205ENST00000473969 N6AMT1Q9Y5N5 214 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 TMEM14AQ9Y6G1 99 aa11.77□□□□□ -0.53
USF1-205ENST00000473969 LOC390937A0A1W2PQ73 354 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 ERICH4A6NGS2 130 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 ANKRD65E5RJM6 399 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 NDUFS8O00217 210 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 SPRY3O43610 288 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 SELENOFO60613 162 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 INHBBP09529 407 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 SLC25A16P16260 332 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 SLC2A5P22732 501 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 ATP6V1E1P36543 226 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 PRKXP51817 358 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 PSG7Q13046 419 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 KCTD18Q6PI47 426 aaPredicted RBP11.76□□□□□ -0.53
USF1-205ENST00000473969 RHOUQ7L0Q8 258 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 MRPL21Q7Z2W9 205 aaKnown RBP11.76□□□□□ -0.53
USF1-205ENST00000473969 OTOSQ8NHW6 89 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 FAM81AQ8TBF8 368 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 ST7LQ8TDW4 575 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 TRUB1Q8WWH5 349 aaKnown RBP11.76□□□□□ -0.53
USF1-205ENST00000473969 RFKQ969G6 155 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 DIRC2Q96SL1 478 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 CNN2Q99439 309 aaKnown RBP11.76□□□□□ -0.53
USF1-205ENST00000473969 REG4Q9BYZ8 158 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 EGLN1Q9GZT9 426 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 PURGQ9UJV8 347 aaKnown RBP11.76□□□□□ -0.53
USF1-205ENST00000473969 ZDHHC8Q9ULC8 765 aa11.76□□□□□ -0.53
USF1-205ENST00000473969 SNTNA6NMZ2 147 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 RNF223E7ERA6 249 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 M0R129 80 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 TBX1O43435 398 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 ANXA2P07355 339 aaKnown RBP11.75□□□□□ -0.53
USF1-205ENST00000473969 MRPL3P09001 348 aaKnown RBP11.75□□□□□ -0.53
USF1-205ENST00000473969 ANPEPP15144 967 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 KITLGP21583 273 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 RCN1Q15293 331 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 TSTQ16762 297 aaKnown RBP11.75□□□□□ -0.53
USF1-205ENST00000473969 RSPO1Q2MKA7 263 aaPredicted RBP11.75□□□□□ -0.53
USF1-205ENST00000473969 KRTAP27-1Q3LI81 207 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 FAM209AQ5JX71 171 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 AADACL4Q5VUY2 407 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 FBXW12Q6X9E4 464 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 COLCA1Q6ZS62 124 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 KRT77Q7Z794 578 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 ZNF555Q8NEP9 628 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 OR10S1Q8NGN2 331 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 RNF133Q8WVZ7 376 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 RDH5Q92781 318 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 ZNF582Q96NG8 517 aaPredicted RBP11.75□□□□□ -0.53
USF1-205ENST00000473969 POFUT1Q9H488 388 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 NKIRAS2Q9NYR9 191 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 WARS2Q9UGM6 360 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms