RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 KIAA0100Q14667 2235 aaKnown RBP12.74□□□□□ -0.37
NHLRC3-204ENST00000473371 PMP2P02689 132 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 IL12BP29460 328 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 RFC3P40938 356 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 TMEM244Q5VVB8 128 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 SLC30A7Q8NEW0 376 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 MARCH1Q8TCQ1 289 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 FGGYQ96C11 551 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 CARHSP1Q9Y2V2 147 aaKnown RBP12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 SRSF10O75494 262 aaKnown RBP12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 CTSEP14091 401 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 GNB3P16520 340 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 PGCP20142 388 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 CRABP1P29762 137 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 CBX5P45973 191 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 PNLIPRP2P54317 469 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 DCXRQ7Z4W1 244 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 TMEM151BQ8IW70 566 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 SLC22A18ASQ8N1D0 253 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 MAP3K3Q99759 626 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 ESRP2Q9H6T0 727 aaKnown RBP12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 IFT22Q9H7X7 185 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 CENPMQ9NSP4 180 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 TMED7-TICAM2A0A0A6YYA0 188 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 LOC101059948A0A1B0GTJ6 334 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 B4DGG1 531 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 NPBWR1P48145 328 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 PAQR4Q8N4S7 273 aaPredicted RBP12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 USB1Q9BQ65 265 aaKnown RBP12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 TMEM100Q9NV29 134 aa12.73□□□□□ -0.37
NHLRC3-204ENST00000473371 TDRD6O60522 2096 aaKnown RBP12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 FRG2CA6NGY1 282 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 NUDT19A8MXV4 375 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 ISG15P05161 165 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 UNC119Q13432 240 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 MICBQ29980 383 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 C10orf91Q5T1B1 145 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 TMPPEQ6ZT21 453 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 KDM8Q8N371 416 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 TBL1XR1Q9BZK7 514 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 SLC7A5P2Q9GIP4 190 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 MMP26Q9NRE1 261 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 SOX1O00570 391 aaPredicted RBP12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 GALNSP34059 522 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 TAS2R31P59538 309 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 CYCSP99999 105 aaKnown RBP12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 NAAAQ02083 359 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 C1orf140Q5VVS0 124 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 LYPD6Q86Y78 171 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 OR52N4Q8NGI2 321 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 OR4A4PQ8NGN8 299 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 RRNAD1Q96FB5 475 aaKnown RBP12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 RNF126Q9BV68 326 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 ZFP57Q9NU63 452 aa12.72□□□□□ -0.37
NHLRC3-204ENST00000473371 ZNF705EA8MWA4 302 aaPredicted RBP12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 DXOO77932 396 aaKnown RBP12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 CX3CR1P49238 355 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 PGAP1Q75T13 922 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 OR1M1Q8NGA1 313 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 OR10R2Q8NGX6 335 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 PHOSPHO2Q8TCD6 241 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 NMES1Q9C002 83 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 OR11A1Q9GZK7 315 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 FN3KRPQ9HA64 309 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 CYTL1Q9NRR1 136 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 UQCC1Q9NVA1 299 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 RHBDD3Q9Y3P4 386 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 CHD9Q3L8U1 2897 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 PLPP3O14495 311 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 H2BFMP0C1H6 154 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 CD1CP29017 333 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 DCDP81605 110 aaKnown RBP12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 ZNF528Q3MIS6 628 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 ZSCAN4Q8NAM6 433 aaPredicted RBP12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 DTWD2Q8NBA8 298 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 OR4K15Q8NH41 348 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 CPNE2Q96FN4 548 aaPredicted RBP12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 TCTN2Q96GX1 697 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 CDC6Q99741 560 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 SEC11CQ9BY50 192 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 WBP1LQ9NX94 342 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 COA4Q9NYJ1 87 aa12.71□□□□□ -0.37
NHLRC3-204ENST00000473371 CDH23Q9H251 3354 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 LRP4O75096 1905 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 DBX1A6NMT0 343 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 AHSA1O95433 338 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 CA3P07451 260 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 VSIG8P0DPA2 414 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 RABIFP47224 123 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 POLR2HP52434 150 aaKnown RBP12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 FMODQ06828 376 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 PJVKQ0ZLH3 352 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 HLA-DQA1Q5Y7H0 255 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 ZNF585AQ6P3V2 769 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 C2CD4CQ8TF44 421 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 ROBO4Q8WZ75 1007 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 TSLPQ969D9 159 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 MICU1Q9BPX6 476 aa12.71□□□□□ -0.38
NHLRC3-204ENST00000473371 OR2S2Q9NQN1 319 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms