RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 AQP3Q92482 292 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 MARC2Q969Z3 335 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 PRRT1Q99946 306 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 NKX6-2Q9C056 277 aaPredicted RBP18.85■□□□□ 0.61
COL18A1-207ENST00000473212 PCDHB16Q9NRJ7 776 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 ZNF107Q9UII5 783 aaPredicted RBP18.85■□□□□ 0.61
COL18A1-207ENST00000473212 P2RY10O00398 339 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 SNTB1Q13884 538 aaKnown RBP18.85■□□□□ 0.61
COL18A1-207ENST00000473212 C1orf100Q5SVJ3 147 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 CASTOR1Q8WTX7 329 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 FAM46BQ96A09 425 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 MED29Q9NX70 200 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 DMDP11532 3685 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 ASCC3Q8N3C0 2202 aaKnown RBP18.85■□□□□ 0.61
COL18A1-207ENST00000473212 C9orf170A2RU37 121 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 CASRP41180 1078 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 EIF1AXP47813 144 aaKnown RBP18.84■□□□□ 0.61
COL18A1-207ENST00000473212 POLR2HP52434 150 aaKnown RBP18.84■□□□□ 0.61
COL18A1-207ENST00000473212 IL13RA1P78552 427 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 CFHR1Q03591 330 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 ZNF260Q3ZCT1 412 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 PAN3Q58A45 887 aaKnown RBP18.84■□□□□ 0.61
COL18A1-207ENST00000473212 RNF144BQ7Z419 303 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 NUDCD2Q8WVJ2 157 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 GAREM1Q9H706 876 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 CNTD2Q9H8S5 307 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 TMEM269A0A1B0GVZ9 245 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 LOC390937A0A1W2PQ73 354 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 A8MVM7 634 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 F5H0A9 414 aaPredicted RBP18.84■□□□□ 0.61
COL18A1-207ENST00000473212 RAB27BO00194 218 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 UNQ6126/PRO20091Q6UXV3 157 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 KCTD9Q7L273 389 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 MKL2Q9ULH7 1088 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 RHBDD3Q9Y3P4 386 aa18.84■□□□□ 0.61
COL18A1-207ENST00000473212 METTL21EPA6NDL7 271 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 MPTX1A8MV57 137 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 SULT2B1O00204 365 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 NUDT21O43809 227 aaKnown RBP18.83■□□□□ 0.61
COL18A1-207ENST00000473212 ZNF823P16415 610 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 CRABP1P29762 137 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 CD96P40200 585 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 PRKXP51817 358 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 ELAVL1Q15717 326 aaKnown RBP18.83■□□□□ 0.61
COL18A1-207ENST00000473212 PDSS1Q5T2R2 415 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 LYPD6Q86Y78 171 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 OR1S2Q8NGQ3 325 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 PHYHIPLQ96FC7 376 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 SLC6A15Q9H2J7 730 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 C8orf33Q9H7E9 229 aaPredicted RBP18.83■□□□□ 0.61
COL18A1-207ENST00000473212 SLC2A8Q9NY64 477 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 CTSFQ9UBX1 484 aa18.83■□□□□ 0.61
COL18A1-207ENST00000473212 CPED1A4D0V7 1026 aa18.83■□□□□ 0.6
COL18A1-207ENST00000473212 EEF1E1-BLOC1S5C9J1V9 151 aa18.83■□□□□ 0.6
COL18A1-207ENST00000473212 ADAM10O14672 748 aa18.83■□□□□ 0.6
COL18A1-207ENST00000473212 FOLR1P15328 257 aa18.83■□□□□ 0.6
COL18A1-207ENST00000473212 NME1P15531 152 aaKnown RBP18.83■□□□□ 0.6
COL18A1-207ENST00000473212 VAMP1P23763 118 aa18.83■□□□□ 0.6
COL18A1-207ENST00000473212 ADAD2Q8NCV1 583 aaKnown RBP18.83■□□□□ 0.6
COL18A1-207ENST00000473212 THAP6Q8TBB0 222 aa18.83■□□□□ 0.6
COL18A1-207ENST00000473212 MITD1Q8WV92 249 aa18.83■□□□□ 0.6
COL18A1-207ENST00000473212 FGGYQ96C11 551 aa18.83■□□□□ 0.6
COL18A1-207ENST00000473212 PHB2Q99623 299 aa18.83■□□□□ 0.6
COL18A1-207ENST00000473212 MBD2Q9UBB5 411 aa18.83■□□□□ 0.6
COL18A1-207ENST00000473212 PCDHB10Q9UN67 800 aa18.83■□□□□ 0.6
COL18A1-207ENST00000473212 STK17BO94768 372 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 AKR1C4P17516 323 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 RAB3AP20336 220 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 HRH1P35367 487 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 PAQR4Q8N4S7 273 aaPredicted RBP18.82■□□□□ 0.6
COL18A1-207ENST00000473212 PTX4Q96A99 478 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 MICU1Q9BPX6 476 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 FAM117AQ9C073 453 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 VN1R1Q9GZP7 353 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 CENPMQ9NSP4 180 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 RAB22AQ9UL26 194 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 LILRA5A6NI73 299 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 IL2RAP01589 272 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 IGLV3-19P01714 112 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 OPN1LWP04000 364 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 ISG15P05161 165 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 BDKRB2P30411 391 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 AKR1C2P52895 323 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 SLC26A5P58743 744 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 AKR1C1Q04828 323 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 UNC119Q13432 240 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 PHF19Q5T6S3 580 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 ZNF704Q6ZNC4 412 aaPredicted RBP18.82■□□□□ 0.6
COL18A1-207ENST00000473212 INO80EQ8NBZ0 244 aaPredicted RBP18.82■□□□□ 0.6
COL18A1-207ENST00000473212 SLC26A10Q8NG04 563 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 ST7LQ8TDW4 575 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 EMC6Q9BV81 110 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 FOXQ1Q9C009 403 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 ASF1BQ9NVP2 202 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 VDAC3Q9Y277 283 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 ARID1AO14497 2285 aa18.82■□□□□ 0.6
COL18A1-207ENST00000473212 IGHV1OR15-9A0A0B4J2B8 117 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 OR2AT4A6NND4 320 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 AHSA1O95433 338 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 IGHMP01871 453 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms