RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 TACC2O95359 2948 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 POLQO75417 2590 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 C17orf100A8MU93 164 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 NDUFS8O00217 210 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 TIMM8AO60220 97 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-211ENST00000472490 CLPTM1O96005 669 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 LCATP04180 440 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 ANPEPP15144 967 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 RAC2P15153 192 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 OTX1P32242 354 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-211ENST00000472490 PDLIM4P50479 330 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 MAD2L1BPQ15013 274 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-211ENST00000472490 RCN1Q15293 331 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 FAM209AQ5JX71 171 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 SLC16A9Q7RTY1 509 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 ZNF540Q8NDQ6 660 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 THEM6Q8WUY1 208 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 RNF133Q8WVZ7 376 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 FAM168AQ92567 244 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 HAVCR1Q96D42 359 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 RDH12Q96NR8 316 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 IL4I1Q96RQ9 567 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 DIRC2Q96SL1 478 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 MNTQ99583 582 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 YIPF3Q9GZM5 350 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 NKIRAS2Q9NYR9 191 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 MYEF2Q9P2K5 600 aaKnown RBP12.16□□□□□ -0.46
BRCA1-211ENST00000472490 LAMP5Q9UJQ1 280 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 STARD10Q9Y365 291 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 SPG11Q96JI7 2443 aa12.16□□□□□ -0.46
BRCA1-211ENST00000472490 TEX15Q9BXT5 2789 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 MAST4O15021 2626 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 DSCAMO60469 2012 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 LOC390937A0A1W2PQ73 354 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 ERICH4A6NGS2 130 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 SNTNA6NMZ2 147 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 ANKRD65E5RJM6 399 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 SELENOFO60613 162 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 H2BFMP0C1H6 154 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 NAT2P11245 290 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 DAOP14920 347 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 SELEP16581 610 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 MPV17P39210 176 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 NAA10P41227 235 aaPredicted RBP12.15□□□□□ -0.46
BRCA1-211ENST00000472490 ZNF81P51508 661 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 POU4F2Q12837 409 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 PSG7Q13046 419 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 TMED1Q13445 227 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 GGTLC2Q14390 218 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 RSPO1Q2MKA7 263 aaPredicted RBP12.15□□□□□ -0.46
BRCA1-211ENST00000472490 AADACL4Q5VUY2 407 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 KCTD18Q6PI47 426 aaPredicted RBP12.15□□□□□ -0.46
BRCA1-211ENST00000472490 FBXW12Q6X9E4 464 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 DNM1P46Q6ZS02 220 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 ZCCHC24Q8N2G6 241 aaKnown RBP12.15□□□□□ -0.46
BRCA1-211ENST00000472490 ZNF525Q8N782 197 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 OR10S1Q8NGN2 331 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 FAM81AQ8TBF8 368 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 ASB17Q8WXJ9 295 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 CMBLQ96DG6 245 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 C18orf12Q96KH6 178 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 CNN2Q99439 309 aaKnown RBP12.15□□□□□ -0.46
BRCA1-211ENST00000472490 TPK1Q9H3S4 243 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 NIPAL2Q9H841 368 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 DECR2Q9NUI1 292 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 HAO2Q9NYQ3 351 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 WARS2Q9UGM6 360 aaKnown RBP12.15□□□□□ -0.46
BRCA1-211ENST00000472490 ZDHHC8Q9ULC8 765 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 LRBAP50851 2863 aa12.15□□□□□ -0.46
BRCA1-211ENST00000472490 CADP27708 2225 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 PHYHO14832 338 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 MPZL2O60487 215 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 PSKH1P11801 424 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 SLC25A16P16260 332 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 KITLGP21583 273 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 ATP6V1E1P36543 226 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 MMP15P51511 669 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 MRPS11P82912 194 aaKnown RBP12.14□□□□□ -0.47
BRCA1-211ENST00000472490 TNK1Q13470 666 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 TRIP10Q15642 601 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 ALKBH6Q3KRA9 238 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 ZIK1Q3SY52 487 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-211ENST00000472490 MEDAGQ5VYS4 303 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 DEGS2Q6QHC5 323 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 PACRGLQ8N7B6 248 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 ZNF283Q8N7M2 679 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 ZNF555Q8NEP9 628 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 UBASH3BQ8TF42 649 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 ZNF582Q96NG8 517 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-211ENST00000472490 MROQ9BYG7 248 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 EGLN1Q9GZT9 426 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 OPA3Q9H6K4 179 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 DCLRE1BQ9H816 532 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 PTTG3PQ9NZH4 202 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 PURGQ9UJV8 347 aaKnown RBP12.14□□□□□ -0.47
BRCA1-211ENST00000472490 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.14□□□□□ -0.47
BRCA1-211ENST00000472490 GMPPBQ9Y5P6 360 aa12.14□□□□□ -0.47
BRCA1-211ENST00000472490 CCDC182A6NF36 153 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 TRIM64A6NGJ6 449 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms