RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 ZDHHC8Q9ULC8 765 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 NDRG4Q9ULP0 352 aaKnown RBP6.76□□□□□ -1.33
USP48-207ENST00000471752 PPP1R3CQ9UQK1 317 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 PCDHGB1Q9Y5G3 927 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 INSIG2Q9Y5U4 225 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 HTR3EA5X5Y0 456 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 ARPC2O15144 300 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 KCNAB3O43448 404 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 SNX3O60493 162 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 GASTP01350 101 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 ACSM4P0C7M7 580 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 CLUP10909 449 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 ANPEPP15144 967 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 RAC2P15153 192 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 ZNF12P17014 697 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 ATP6V1B2P21281 511 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 IFNA8P32881 189 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 GUCA1AP43080 201 aaPredicted RBP6.75□□□□□ -1.33
USP48-207ENST00000471752 GSSP48637 474 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 COMPP49747 757 aaPredicted RBP6.75□□□□□ -1.33
USP48-207ENST00000471752 LSM6P62312 80 aaKnown RBP6.75□□□□□ -1.33
USP48-207ENST00000471752 BTG1P62324 171 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 ACTG1P63261 375 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 SPIBQ01892 262 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 PRB3Q04118 309 aaPredicted RBP6.75□□□□□ -1.33
USP48-207ENST00000471752 PAX8Q06710 450 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 SCRN3Q0VDG4 424 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 AQP6Q13520 282 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 SNAI3Q3KNW1 292 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 ANKDD1AQ495B1 522 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 GPR139Q6DWJ6 353 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 PGBD2Q6P3X8 592 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 CYP2R1Q6VVX0 501 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 FBXW12Q6X9E4 464 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 ZNF841Q6ZN19 808 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 ZNF826PQ6ZT77 177 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 USP43Q70EL4 1123 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 SPATC1Q76KD6 591 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 ARPINQ7Z6K5 226 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 CYP4Z1Q86W10 505 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 ZNF511Q8NB15 262 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 OR8G5Q8NG78 346 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 OR9Q2Q8NGE9 314 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 OR52E2Q8NGJ4 325 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 OR2AE1Q8NHA4 323 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 NANPQ8TBE9 248 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 ZNF418Q8TF45 676 aaPredicted RBP6.75□□□□□ -1.33
USP48-207ENST00000471752 RAB39BQ96DA2 213 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 SLC30A2Q9BRI3 323 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 BTBD10Q9BSF8 475 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 IFT27Q9BW83 186 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 ANKRD19PQ9H560 264 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 GORASP2Q9H8Y8 452 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 CYSLTR2Q9NS75 346 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 UFSP2Q9NUQ7 469 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 IL19Q9UHD0 177 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 CYB5R1Q9UHQ9 305 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 AURKCQ9UQB9 309 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 TMEM5Q9Y2B1 443 aa6.75□□□□□ -1.33
USP48-207ENST00000471752 FAM32AQ9Y421 112 aaKnown RBP6.75□□□□□ -1.33
USP48-207ENST00000471752 WNK1Q9H4A3 2382 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 A0A0A6YYJ9 748 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 A0A1B0GW55 424 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 C22orf46C9J442 243 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 J3QLI3 93 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 TNFRSF13BO14836 293 aaPredicted RBP6.74□□□□□ -1.33
USP48-207ENST00000471752 AHCYL1O43865 530 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 OR10H3O60404 316 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 TFF1P04155 84 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 GYPBP06028 91 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 DUX4L2P0CJ85 424 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 DUX4L3P0CJ86 424 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 DUX4L4P0CJ87 422 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 DUX4L5P0CJ88 424 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 DUX4L6P0CJ89 424 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 DUX4L7P0CJ90 424 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 SLC2A1P11166 492 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 GSTM3P21266 225 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 PCMT1P22061 227 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 CA6P23280 308 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 OMGP23515 440 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 NOS3P29474 1203 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 RRM2P31350 389 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 MS4A2Q01362 244 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 ZNF92Q03936 586 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.74□□□□□ -1.33
USP48-207ENST00000471752 COX10Q12887 443 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 AWAT1Q58HT5 328 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 SFRP4Q6FHJ7 346 aaPredicted RBP6.74□□□□□ -1.33
USP48-207ENST00000471752 ZNF770Q6IQ21 691 aaPredicted RBP6.74□□□□□ -1.33
USP48-207ENST00000471752 DUX4L9Q6RFH8 374 aaPredicted RBP6.74□□□□□ -1.33
USP48-207ENST00000471752 ZBTB46Q86UZ6 589 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 KLBQ86Z14 1044 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 BPIFB2Q8N4F0 458 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 OR4C15Q8NGM1 316 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 OR9Q1Q8NGQ5 310 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 OR4Q3Q8NH05 313 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 FANK1Q8TC84 345 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 FNDC8Q8TC99 324 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 ST7LQ8TDW4 575 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms