RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 SLC30A7Q8NEW0 376 aa16.65■□□□□ 0.26
PSPC1-203ENST00000471658 USB1Q9BQ65 265 aaKnown RBP16.65■□□□□ 0.26
PSPC1-203ENST00000471658 HCFC1P51610 2035 aa16.64■□□□□ 0.25
PSPC1-203ENST00000471658 MYO18BQ8IUG5 2567 aa16.64■□□□□ 0.25
PSPC1-203ENST00000471658 CLPTM1O96005 669 aa16.64■□□□□ 0.25
PSPC1-203ENST00000471658 TFAP2AP05549 437 aa16.64■□□□□ 0.25
PSPC1-203ENST00000471658 ACSM4P0C7M7 580 aa16.64■□□□□ 0.25
PSPC1-203ENST00000471658 COX5BP10606 129 aa16.64■□□□□ 0.25
PSPC1-203ENST00000471658 OTX1P32242 354 aaPredicted RBP16.64■□□□□ 0.25
PSPC1-203ENST00000471658 APLNRP35414 380 aa16.64■□□□□ 0.25
PSPC1-203ENST00000471658 GDI2P50395 445 aaKnown RBP16.64■□□□□ 0.25
PSPC1-203ENST00000471658 NANOS3P60323 173 aaKnown RBP16.64■□□□□ 0.25
PSPC1-203ENST00000471658 SPTSSAQ969W0 71 aa16.64■□□□□ 0.25
PSPC1-203ENST00000471658 SLC22A13Q9Y226 551 aa16.64■□□□□ 0.25
PSPC1-203ENST00000471658 TMEM269A0A1B0GVZ9 245 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 M0R135 149 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 PPP3CBP16298 524 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 PSMB9P28065 219 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 GP2P55259 537 aaKnown RBP16.63■□□□□ 0.25
PSPC1-203ENST00000471658 ZNF121P58317 390 aaPredicted RBP16.63■□□□□ 0.25
PSPC1-203ENST00000471658 SORDQ00796 357 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 ZNF367Q7RTV3 350 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 PRSS35Q8N3Z0 413 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 FAM169BQ8N8A8 192 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 MUL1Q969V5 352 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 ZNF799Q96GE5 643 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 OPALINQ96PE5 141 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 MGLLQ99685 303 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 FAM206AQ9NX38 181 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 ZNF319Q9P2F9 582 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 NDRG3Q9UGV2 375 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 ST6GALNAC2Q9UJ37 374 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 GTF2A1LQ9UNN4 478 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 R4GMQ9 66 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 DCTDP32321 178 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 KIR3DL2P43630 455 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 SLC6A9P48067 706 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 TPTEP56180 551 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 ARMCX4Q5H9R4 360 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 FAM57BQ71RH2 274 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 PRSS45Q7RTY3 260 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 TMIGD2Q96BF3 282 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 COG8Q96MW5 612 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 MYCBPQ99417 103 aaPredicted RBP16.63■□□□□ 0.25
PSPC1-203ENST00000471658 G6PC2Q9NQR9 355 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 FRRS1LQ9P0K9 344 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 ATPIF1Q9UII2 106 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 SCOCQ9UIL1 159 aa16.63■□□□□ 0.25
PSPC1-203ENST00000471658 USP9XQ93008 2570 aaPredicted RBP16.62■□□□□ 0.25
PSPC1-203ENST00000471658 TUBAL3A6NHL2 446 aa16.62■□□□□ 0.25
PSPC1-203ENST00000471658 ANXA2P07355 339 aaKnown RBP16.62■□□□□ 0.25
PSPC1-203ENST00000471658 JUNBP17275 347 aaPredicted RBP16.62■□□□□ 0.25
PSPC1-203ENST00000471658 CALCRP30988 508 aa16.62■□□□□ 0.25
PSPC1-203ENST00000471658 WNT5AP41221 380 aa16.62■□□□□ 0.25
PSPC1-203ENST00000471658 PSMA6P60900 246 aaKnown RBP16.62■□□□□ 0.25
PSPC1-203ENST00000471658 TIGD6Q17RP2 521 aa16.62■□□□□ 0.25
PSPC1-203ENST00000471658 TBC1D28Q2M2D7 210 aa16.62■□□□□ 0.25
PSPC1-203ENST00000471658 ODF4Q2M2E3 257 aa16.62■□□□□ 0.25
PSPC1-203ENST00000471658 IL17RDQ8NFM7 739 aa16.62■□□□□ 0.25
PSPC1-203ENST00000471658 OR2G2Q8NGZ5 317 aa16.62■□□□□ 0.25
PSPC1-203ENST00000471658 DOK1Q99704 481 aa16.62■□□□□ 0.25
PSPC1-203ENST00000471658 OR51B6Q9H340 312 aa16.62■□□□□ 0.25
PSPC1-203ENST00000471658 NIPAL2Q9H841 368 aa16.62■□□□□ 0.25
PSPC1-203ENST00000471658 SPTBN1Q01082 2364 aaKnown RBP16.62■□□□□ 0.25
PSPC1-203ENST00000471658 DPRXA6NFQ7 191 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 LOC110117498-PIK3R3F6TDL0 507 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 OGG1O15527 345 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 NGFP01138 241 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 MMP16P51512 607 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 ACSM1Q08AH1 577 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 ALKBH1Q13686 389 aaKnown RBP16.61■□□□□ 0.25
PSPC1-203ENST00000471658 TSTQ16762 297 aaKnown RBP16.61■□□□□ 0.25
PSPC1-203ENST00000471658 ZNF829Q3KNS6 432 aaPredicted RBP16.61■□□□□ 0.25
PSPC1-203ENST00000471658 SNAI3Q3KNW1 292 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 WDR38Q5JTN6 314 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 DRAM2Q6UX65 266 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 CATSPERDQ86XM0 798 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 EGFL6Q8IUX8 553 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 SSC4DQ8WTU2 575 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 FCGR1BQ92637 280 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 C4orf45Q96LM5 186 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 TRIM36Q9NQ86 728 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 OR52A1Q9UKL2 312 aa16.61■□□□□ 0.25
PSPC1-203ENST00000471658 IGHV2OR16-5A0A0B4J2B6 119 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 LCATP04180 440 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 ZNF35P13682 527 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 CELP19835 753 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 LIPAP38571 399 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 NAAAQ02083 359 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 SLC3A1Q07837 685 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 SPOCK1Q08629 439 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 MLLT11Q13015 90 aaPredicted RBP16.6■□□□□ 0.25
PSPC1-203ENST00000471658 CDK5R1Q15078 307 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 SYT6Q5T7P8 510 aaPredicted RBP16.6■□□□□ 0.25
PSPC1-203ENST00000471658 FDX2Q6P4F2 183 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 ARL9Q6T311 187 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 ZNF101Q8IZC7 436 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 RDH10Q8IZV5 341 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 PBOV1Q9GZY1 135 aa16.6■□□□□ 0.25
PSPC1-203ENST00000471658 CDH20Q9HBT6 801 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms