RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 GPR107Q5VW38 600 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 CERS6Q6ZMG9 384 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 SNX20Q7Z614 316 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 NECAB1Q8N987 351 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 C11orf72Q8NBR9 251 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 LRRC29Q8WV35 223 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 ILKAPQ9H0C8 392 aaPredicted RBP1.24□□□□□ -2.21
RBM39-228ENST00000471635 COX16Q9P0S2 106 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 LGALS13Q9UHV8 139 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 TRMT112Q9UI30 125 aaKnown RBP1.24□□□□□ -2.21
RBM39-228ENST00000471635 CBY1Q9Y3M2 126 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 HYOU1Q9Y4L1 999 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 PALLDQ8WX93 1383 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 SMKR1H3BMG3 65 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 H7C417 338 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 RDH16O75452 317 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 H6PDO95479 791 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 IGLV3-25P01717 112 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 ZNF688P0C7X2 276 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 GGT1P19440 569 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 ACLYP53396 1101 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 TAS2R31P59538 309 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 PPP1CBP62140 327 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 CDK5Q00535 292 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 QPRTQ15274 297 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 SSX2Q16385 188 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 MRPL23Q16540 153 aaKnown RBP1.23□□□□□ -2.21
RBM39-228ENST00000471635 SLC8B1Q6J4K2 584 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 TMEM136Q6ZRR5 245 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 ADM2Q7Z4H4 148 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 TMEM150AQ86TG1 271 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 FAM228AQ86W67 206 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 TMEM256Q8N2U0 113 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 COX18Q8N8Q8 333 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 SPANXA2-OT1Q8N9U9 137 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 SLC2A14Q8TDB8 520 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 ACMSDQ8TDX5 336 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 ZNF606Q8WXB4 792 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 RBBP8Q99708 897 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 HSD17B10Q99714 261 aaKnown RBP1.23□□□□□ -2.21
RBM39-228ENST00000471635 MICU1Q9BPX6 476 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 GGTLC1Q9BX51 225 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 SAMD10Q9BYL1 202 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 C1orf198Q9H425 327 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 HRASLS2Q9NWW9 162 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 UXTQ9UBK9 157 aaPredicted RBP1.23□□□□□ -2.21
RBM39-228ENST00000471635 MTFP1Q9UDX5 166 aa1.23□□□□□ -2.21
RBM39-228ENST00000471635 COL5A3P25940 1745 aaPredicted RBP1.23□□□□□ -2.21
RBM39-228ENST00000471635 KMT2BQ9UMN6 2715 aaPredicted RBP1.22□□□□□ -2.21
RBM39-228ENST00000471635 SMCO2A6NFE2 343 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 BTNL10A8MVZ5 291 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 K7EMT4 169 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 AIM2O14862 343 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 NVLO15381 856 aaKnown RBP1.22□□□□□ -2.21
RBM39-228ENST00000471635 CLOCKO15516 846 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 FKBP6O75344 327 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 CLDN11O75508 207 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 SERPINE2P07093 398 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 UQCRFS1P1P0C7P4 283 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 PABPC4LP0CB38 370 aaKnown RBP1.22□□□□□ -2.21
RBM39-228ENST00000471635 ERGP11308 486 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 ZNF24P17028 368 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 ME2P23368 584 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 CDH6P55285 790 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 GFERP55789 205 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 STXBP1P61764 594 aaKnown RBP1.22□□□□□ -2.21
RBM39-228ENST00000471635 CCNA1P78396 465 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 TCEAL5Q5H9L2 206 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 PPM1LQ5SGD2 360 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 UBE2UQ5VVX9 321 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 NPSR1Q6W5P4 371 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 MBOAT1Q6ZNC8 495 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 SLC22A9Q8IVM8 553 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 IQCKQ8N0W5 287 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 TTLQ8NG68 377 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 OR7G2Q8NG99 324 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 NUBPLQ8TB37 319 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 KLF14Q8TD94 323 aaPredicted RBP1.22□□□□□ -2.21
RBM39-228ENST00000471635 TCEAL3Q969E4 200 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 TMEM230Q96A57 120 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 EEF1AKMT3Q96AZ1 226 aa1.22□□□□□ -2.21
RBM39-228ENST00000471635 ZNF317Q96PQ6 595 aaPredicted RBP1.22□□□□□ -2.21
RBM39-228ENST00000471635 EXOSC4Q9NPD3 245 aaKnown RBP1.22□□□□□ -2.21
RBM39-228ENST00000471635 TRAV19A0A0A6YYK7 116 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 IGHV3-72A0A0B4J1Y9 119 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 IGHV7-4-1A0A0J9YVY3 117 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 A0A0J9YXV3 536 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 NCBP2LA6PVI3 153 aaKnown RBP1.21□□□□□ -2.22
RBM39-228ENST00000471635 LYRM9A8MSI8 78 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 KRBOX1C9JBD0 128 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 H0Y8G0 127 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 CHST10O43529 356 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 OR2J3O76001 311 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 SLC22A5O76082 557 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 AQP8O94778 261 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 SEMA3DO95025 777 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 U2AF2P26368 475 aaKnown RBP eCLIP1.21□□□□□ -2.222e-9■□□□□ 11
RBM39-228ENST00000471635 TGFBR2P37173 567 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 SLC1A1P43005 524 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 TNNT2P45379 298 aaPredicted RBP1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms