RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 ZNF645Q8N7E2 425 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 GPR26Q8NDV2 337 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 OR11H7Q8NGC8 314 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 ACMSDQ8TDX5 336 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 CAPSLQ8WWF8 208 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 ELMO1Q92556 727 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 ZNF317Q96PQ6 595 aaPredicted RBP2.49□□□□□ -2.01
SSB-209ENST00000470621 CDX2Q99626 313 aaPredicted RBP2.49□□□□□ -2.01
SSB-209ENST00000470621 LHX5Q9H2C1 402 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 ANKRA2Q9H9E1 313 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 SMIM26A0A096LP01 95 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 IGHV3-72A0A0B4J1Y9 119 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 IGHV7-4-1A0A0J9YVY3 117 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 A0A0J9YXV3 536 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 EIF3HO15372 352 aaKnown RBP eCLIP2.48□□□□□ -2.01
SSB-209ENST00000470621 CLDN11O75508 207 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 FLOT1O75955 427 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 SLC1A1P43005 524 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 EIF3EP60228 445 aaKnown RBP2.48□□□□□ -2.01
SSB-209ENST00000470621 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 C9orf135Q5VTT2 229 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 REEP3Q6NUK4 255 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 C12orf54Q6X4T0 127 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 MRPL55Q7Z7F7 128 aaKnown RBP2.48□□□□□ -2.01
SSB-209ENST00000470621 OR56B2PQ8NGI1 322 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 APH1BQ8WW43 257 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 ECHDC3Q96DC8 303 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 CENPKQ9BS16 269 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 RSG1Q9BU20 258 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 ANKRD60Q9BZ19 345 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 EXOSC4Q9NPD3 245 aaKnown RBP2.48□□□□□ -2.01
SSB-209ENST00000470621 C21orf62Q9NYP8 219 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 SIGLEC7Q9Y286 467 aa2.48□□□□□ -2.01
SSB-209ENST00000470621 TRIP11Q15643 1979 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 TRAV6A0A075B6T7 132 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 TMEM120BA0PK00 339 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 ZNF98A6NK75 572 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 OR5H1A6NKK0 313 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 SCAMP2O15127 329 aaKnown RBP2.47□□□□□ -2.01
SSB-209ENST00000470621 RAD51CO43502 376 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 GLSO94925 669 aaPredicted RBP2.47□□□□□ -2.01
SSB-209ENST00000470621 IGKV1D-16P01601 117 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 IGHV3-11P01762 117 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 CT45A6P0DMU7 189 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 CT45A5P0DMU8 189 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 CT45A7P0DMV0 189 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 RBM34P42696 430 aaKnown RBP2.47□□□□□ -2.01
SSB-209ENST00000470621 TNNT2P45379 298 aaPredicted RBP2.47□□□□□ -2.01
SSB-209ENST00000470621 RBX1P62877 108 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 CYP24A1Q07973 514 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 DGCR6Q14129 220 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 ZNF266Q14584 549 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 XKR7Q5GH72 579 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 CT45A1Q5HYN5 189 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 SPINT4Q6UDR6 99 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 NPSR1Q6W5P4 371 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 SLC16A14Q7RTX9 510 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 NANOGNBQ7Z5D8 188 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 CBLN2Q8IUK8 224 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 OR7G2Q8NG99 324 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 OR5M1Q8NGP8 315 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 CT45A3Q8NHU0 189 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 ZNF606Q8WXB4 792 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 RETNQ9HD89 108 aa2.47□□□□□ -2.01
SSB-209ENST00000470621 CARHSP1Q9Y2V2 147 aaKnown RBP2.47□□□□□ -2.01
SSB-209ENST00000470621 TICRRQ7Z2Z1 1910 aa2.46□□□□□ -2.02
SSB-209ENST00000470621 HEATR9A2RTY3 570 aa2.46□□□□□ -2.02
SSB-209ENST00000470621 EIF4E2O60573 245 aaKnown RBP2.46□□□□□ -2.02
SSB-209ENST00000470621 FUT5Q11128 374 aa2.46□□□□□ -2.02
SSB-209ENST00000470621 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
SSB-209ENST00000470621 TEX30Q5JUR7 227 aa2.46□□□□□ -2.02
SSB-209ENST00000470621 SPIN3Q5JUX0 258 aa2.46□□□□□ -2.02
SSB-209ENST00000470621 PRAMEF20Q5VT98 475 aa2.46□□□□□ -2.02
SSB-209ENST00000470621 WDR34Q96EX3 536 aa2.46□□□□□ -2.02
SSB-209ENST00000470621 ZSCAN16Q9H4T2 348 aaPredicted RBP2.46□□□□□ -2.02
SSB-209ENST00000470621 TMEM27Q9HBJ8 222 aa2.46□□□□□ -2.02
SSB-209ENST00000470621 CCDC59Q9P031 241 aaKnown RBP2.46□□□□□ -2.02
SSB-209ENST00000470621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.46□□□□□ -2.02
SSB-209ENST00000470621 IGHV1-69DA0A0B4J2H0 117 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 C16orf90A8MZG2 172 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 SIRPB1O00241 398 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 AQP8O94778 261 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 PRLHRP49683 370 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 MBOAT2Q6ZWT7 520 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 CMC1Q7Z7K0 106 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 FAM71AQ8IYT1 594 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 CSGALNACT2Q8N6G5 542 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 OR5T1Q8NG75 326 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 OR51E1Q8TCB6 317 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 RNF145Q96MT1 663 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 IP6K3Q96PC2 410 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 LZTS2Q9BRK4 669 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 NUP58Q9BVL2 599 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 PKIBQ9C010 78 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 SLC17A7Q9P2U7 560 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 PITPNC1Q9UKF7 332 aa2.45□□□□□ -2.02
SSB-209ENST00000470621 IGHV3-49A0A0A0MS15 119 aa2.44□□□□□ -2.02
SSB-209ENST00000470621 OR2AG2A6NM03 316 aa2.44□□□□□ -2.02
SSB-209ENST00000470621 H0Y8G0 127 aa2.44□□□□□ -2.02
SSB-209ENST00000470621 RNF13O43567 381 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms