RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 LOC101059948A0A1B0GTJ6 334 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 LOC390937A0A1W2PQ73 354 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 FRG2CA6NGY1 282 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 ZNF98A6NK75 572 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 P2RY10O00398 339 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 FGF16O43320 207 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 ACTL6AO96019 429 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 PSMB6P28072 239 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 PPM1FP49593 454 aaPredicted RBP11.77□□□□□ -0.53
SFXN3-205ENST00000470252 LINC00346Q8IVM7 164 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 TMEM151BQ8IW70 566 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 TMED7-TICAM2A0A0A6YYA0 188 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 A0A0B4J2A0 478 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 TMEM269A0A1B0GVZ9 245 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 OR6C76A6NM76 312 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 EFSO43281 561 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 IFNA6P05013 189 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 CRHP06850 196 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 TPT1P13693 172 aaKnown RBP11.77□□□□□ -0.53
SFXN3-205ENST00000470252 ZNF823P16415 610 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 SERPINF1P36955 418 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 SRSF3P84103 164 aaKnown RBP11.77□□□□□ -0.53
SFXN3-205ENST00000470252 RAB11FIP2Q7L804 512 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 DCXRQ7Z4W1 244 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 ARL11Q969Q4 196 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 SELENOIQ9C0D9 397 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 ZNF768Q9H5H4 540 aaKnown RBP11.77□□□□□ -0.53
SFXN3-205ENST00000470252 SHPKQ9UHJ6 478 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 MKL2Q9ULH7 1088 aa11.77□□□□□ -0.53
SFXN3-205ENST00000470252 DXOO77932 396 aaKnown RBP11.76□□□□□ -0.53
SFXN3-205ENST00000470252 DUS4LO95620 317 aaKnown RBP11.76□□□□□ -0.53
SFXN3-205ENST00000470252 F12P00748 615 aaPredicted RBP11.76□□□□□ -0.53
SFXN3-205ENST00000470252 PMP2P02689 132 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 ISG15P05161 165 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 GNB3P16520 340 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 PGCP20142 388 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 MPZP25189 248 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 CD1CP29017 333 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 CRABP1P29762 137 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 GALNSP34059 522 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 GNALP38405 381 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 HOXA1P49639 335 aaPredicted RBP11.76□□□□□ -0.53
SFXN3-205ENST00000470252 AIMP2Q13155 320 aaKnown RBP11.76□□□□□ -0.53
SFXN3-205ENST00000470252 UNC119Q13432 240 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 PLEKHN1Q494U1 663 aaPredicted RBP11.76□□□□□ -0.53
SFXN3-205ENST00000470252 FAHD2BQ6P2I3 314 aaPredicted RBP11.76□□□□□ -0.53
SFXN3-205ENST00000470252 ZNF704Q6ZNC4 412 aaPredicted RBP11.76□□□□□ -0.53
SFXN3-205ENST00000470252 SPAG16Q8N0X2 631 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 KDM8Q8N371 416 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 PAQR4Q8N4S7 273 aaPredicted RBP11.76□□□□□ -0.53
SFXN3-205ENST00000470252 STOML3Q8TAV4 291 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 FGGYQ96C11 551 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 FAHD2AQ96GK7 314 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 USB1Q9BQ65 265 aaKnown RBP11.76□□□□□ -0.53
SFXN3-205ENST00000470252 RHBDD3Q9Y3P4 386 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 GON4LQ3T8J9 2241 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 F8VVB4 439 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 F8VWA3 439 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 RABIFP47224 123 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 TMEM244Q5VVB8 128 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 C1orf140Q5VVS0 124 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 H3F3CQ6NXT2 135 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 LYPD6Q86Y78 171 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 BAP18Q8IXM2 172 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 MARCH1Q8TCQ1 289 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 ELP5Q8TE02 316 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 TMED6Q8WW62 240 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 TSLPQ969D9 159 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 ADIPOR1Q96A54 375 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 TCTN2Q96GX1 697 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 CNTNAP3BQ96NU0 1288 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 TBL1XR1Q9BZK7 514 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 OR11A1Q9GZK7 315 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 TMEM231Q9H6L2 316 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 TREM1Q9NP99 234 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 CENPMQ9NSP4 180 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 HS3ST3A1Q9Y663 406 aa11.76□□□□□ -0.53
SFXN3-205ENST00000470252 SEC16AO15027 2179 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 PCDH15Q96QU1 1955 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 SOX1O00570 391 aaPredicted RBP11.75□□□□□ -0.53
SFXN3-205ENST00000470252 PLPP3O14495 311 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 CD79AP11912 226 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 HLA-DOBP13765 273 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 RAB13P51153 203 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 NR0B1P51843 470 aaKnown RBP11.75□□□□□ -0.53
SFXN3-205ENST00000470252 FMODQ06828 376 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 NKAPLQ5M9Q1 402 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 TMPPEQ6ZT21 453 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 RTN4RL2Q86UN3 420 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 OR52N4Q8NGI2 321 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 RNF141Q8WVD5 230 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 TLNRD1Q9H1K6 362 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 FN3KRPQ9HA64 309 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 SOHLH2Q9NX45 425 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 TEX13DA0A0J9YY54 714 aaPredicted RBP11.75□□□□□ -0.53
SFXN3-205ENST00000470252 TMEM150CB9EJG8 249 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 POLR2HP52434 150 aaKnown RBP11.75□□□□□ -0.53
SFXN3-205ENST00000470252 DHRS7BQ6IAN0 325 aaPredicted RBP11.75□□□□□ -0.53
SFXN3-205ENST00000470252 TMEM92Q6UXU6 159 aa11.75□□□□□ -0.53
SFXN3-205ENST00000470252 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms