RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 RGCCQ9H4X1 137 aa10.89□□□□□ -0.67
SPTLC1-204ENST00000469778 CXorf56Q9H5V9 222 aa10.89□□□□□ -0.67
SPTLC1-204ENST00000469778 UBTD1Q9HAC8 227 aa10.89□□□□□ -0.67
SPTLC1-204ENST00000469778 CBLN4Q9NTU7 201 aa10.89□□□□□ -0.67
SPTLC1-204ENST00000469778 SLCO1C1Q9NYB5 712 aa10.89□□□□□ -0.67
SPTLC1-204ENST00000469778 ZNF391Q9UJN7 358 aa10.89□□□□□ -0.67
SPTLC1-204ENST00000469778 GRIP1Q9Y3R0 1128 aa10.89□□□□□ -0.67
SPTLC1-204ENST00000469778 DCHS2Q6V1P9 2916 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 A0A1W2PPR1 153 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 EFCAB10A6NFE3 127 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 J3QRE1 110 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 M0R135 149 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 SMPD2O60906 423 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 MT-ND5P03915 603 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 LCKP06239 509 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 RPSAP08865 295 aaKnown RBP10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 OR4A8P0C604 315 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 ACSM4P0C7M7 580 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 DBTP11182 482 aaKnown RBP10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 CCL2P13500 99 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 PAX1P15863 534 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 MYF6P23409 242 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 CFL1P23528 166 aaKnown RBP10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 DNASE1P24855 282 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 DCKP27707 260 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 HSD11B1P28845 292 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 GCH1P30793 250 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 PPP1CBP62140 327 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 SPOCK1Q08629 439 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 MED21Q13503 144 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 ADIPOQQ15848 244 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 MBNL2Q5VZF2 373 aaKnown RBP10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 KRT80Q6KB66 452 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 ZNF322Q6U7Q0 402 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 PAQR4Q8N4S7 273 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 OR1J1Q8NGS3 322 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 ABHD4Q8TB40 342 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 SYNPRQ8TBG9 265 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 MRPL24Q96A35 216 aaKnown RBP10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 ZNF799Q96GE5 643 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 OR8B4Q96RC9 309 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 PLK3Q9H4B4 646 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 OPA3Q9H6K4 179 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 CYSLTR2Q9NS75 346 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 BEX4Q9NWD9 120 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 CNOT2Q9NZN8 540 aaKnown RBP10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 ST6GALNAC2Q9UJ37 374 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 PMF1-BGLAPU3KQ54 211 aa10.88□□□□□ -0.67
SPTLC1-204ENST00000469778 IGLV3-9A0A075B6K5 115 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 IGHV3-13P01766 116 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 LCATP04180 440 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 KRT8P05787 483 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 PIPP12273 146 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 RAC2P15153 192 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 SELEP16581 610 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 WNT5AP41221 380 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 RPS27P42677 84 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 MMP16P51512 607 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 RIDAP52758 137 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 KLF3P57682 345 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 SNRPD2P62316 118 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 ACTA2P62736 377 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 ACTG2P63267 376 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 ZNF91Q05481 1191 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 DBPQ10586 325 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 MRPL28Q13084 256 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 ZMAT1Q5H9K5 638 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 FAM209AQ5JX71 171 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 C6orf52Q5T4I8 152 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 OTPQ5XKR4 325 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 FBXW12Q6X9E4 464 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 ZNF101Q8IZC7 436 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 OR10H4Q8NGA5 316 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 SNX33Q8WV41 574 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 APH1BQ8WW43 257 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 LGALS12Q96DT0 336 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 MARS2Q96GW9 593 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 DOK1Q99704 481 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 MS4A5Q9H3V2 200 aa10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 FGF20Q9NP95 211 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1-204ENST00000469778 ROS1P08922 2347 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 A0A1W2PQL4 384 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 DAPL1A0PJW8 107 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 METTL15A6NJ78 407 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 OVOL3O00110 214 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 DENRO43583 198 aaKnown RBP10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 CLIC3O95833 236 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 NGFP01138 241 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 IGHA1P01876 353 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 ERCC1P07992 297 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 MRPL3P09001 348 aaKnown RBP10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 DBHP09172 617 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 GNAO1P09471 354 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 FAM157BP0CG42 384 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 SLC6A9P48067 706 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 SWI5Q1ZZU3 235 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 ZNF829Q3KNS6 432 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 ZNF283Q8N7M2 679 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 KLF14Q8TD94 323 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 IGFBPL1Q8WX77 278 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms