RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 G6PC2Q9NQR9 355 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 FAM206AQ9NX38 181 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 FRRS1LQ9P0K9 344 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 NUFIP1Q9UHK0 495 aaKnown RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 FBXL3Q9UKT7 428 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 SLC25A15Q9Y619 301 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 CEPT1Q9Y6K0 416 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 R4GMQ9 66 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 CACNA1CQ13936 2221 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 ESPL1Q14674 2120 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 J3QW42 95 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 CCRL2O00421 344 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 GABARAPO95166 117 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 APOC1P02654 83 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 SERPINA5P05154 406 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 ISG15P05161 165 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 ZNF14P17017 642 aaPredicted RBP7.09□□□□□ -1.27
NPHP3-204ENST00000469232 FGF9P31371 208 aaPredicted RBP7.09□□□□□ -1.27
NPHP3-204ENST00000469232 CRYBB2P43320 205 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 KIR3DL2P43630 455 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 ASCL1P50553 236 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 RPS11P62280 158 aaKnown RBP eCLIP7.09□□□□□ -1.27
NPHP3-204ENST00000469232 TFF3Q07654 80 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 ALKBH1Q13686 389 aaKnown RBP7.09□□□□□ -1.27
NPHP3-204ENST00000469232 MED22Q15528 200 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 HIKESHIQ53FT3 197 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 PABPC1L2AQ5JQF8 200 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 TMEM53Q6P2H8 277 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 DRAM2Q6UX65 266 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 UNQ9370/PRO34162Q6UXP9 181 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 GDPGP1Q6ZNW5 385 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 KRT74Q7RTS7 529 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 KRT77Q7Z794 578 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 SATL1Q86VE3 508 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 KLBQ86Z14 1044 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 PRSS35Q8N3Z0 413 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 LRRC18Q8N456 261 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 STEAP2Q8NFT2 490 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 ZNF420Q8TAQ5 688 aaPredicted RBP7.09□□□□□ -1.27
NPHP3-204ENST00000469232 CCDC120Q96HB5 630 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 POM121L2Q96KW2 1035 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 ATF6BQ99941 703 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 KCNN2Q9H2S1 579 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 MOB1AQ9H8S9 216 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 GNG8Q9UK08 70 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 POLR1DQ9Y2S0 133 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 AMDHD2Q9Y303 409 aa7.09□□□□□ -1.27
NPHP3-204ENST00000469232 LOC100509620A0A075B734 347 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 A0A096LPE4 126 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 TRBV5-5A0A0J9YX44 114 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 A0A0U1RQV5 110 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 A0A1W2PPZ6 126 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 LYZL6O75951 148 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 HLA-HP01893 362 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 H2BFMP0C1H6 154 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 ACSM4P0C7M7 580 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 PATE4P0C8F1 98 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 BMP4P12644 408 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 PPP3CBP16298 524 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 BMP5P22003 454 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 CCL1P22362 96 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 PSMA1P25786 263 aaKnown RBP7.09□□□□□ -1.28
NPHP3-204ENST00000469232 PSMB9P28065 219 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 GABRA5P31644 462 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 UGT2B10P36537 528 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 GTF2A1P52655 376 aaPredicted RBP7.09□□□□□ -1.28
NPHP3-204ENST00000469232 TMBIM6P55061 237 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 RAB1AP62820 205 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 TRAM1Q15629 374 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 CTF1Q16619 201 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF829Q3KNS6 432 aaPredicted RBP7.09□□□□□ -1.28
NPHP3-204ENST00000469232 FOXB2Q5VYV0 432 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF774Q6NX45 483 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 MYO7BQ6PIF6 2116 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 FAM220AQ7Z4H9 259 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 GPR141Q7Z602 305 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.09□□□□□ -1.28
NPHP3-204ENST00000469232 ELMOD2Q8IZ81 293 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 MS4A15Q8N5U1 240 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 YIPF7Q8N8F6 280 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 ACBD4Q8NC06 268 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 HSD17B8Q92506 261 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 RGP1Q92546 391 aaPredicted RBP7.09□□□□□ -1.28
NPHP3-204ENST00000469232 UFD1Q92890 307 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 FUNDC2Q9BWH2 189 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 C1QTNF5Q9BXJ0 243 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 FAM192AQ9GZU8 254 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 GALNT8Q9NY28 637 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 PLEK2Q9NYT0 353 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 ENPP5Q9UJA9 477 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 ERRFI1Q9UJM3 462 aaPredicted RBP7.09□□□□□ -1.28
NPHP3-204ENST00000469232 IKZF2Q9UKS7 526 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 SLC5A6Q9Y289 635 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 GRIP1Q9Y3R0 1128 aa7.09□□□□□ -1.28
NPHP3-204ENST00000469232 UBR5O95071 2799 aaPredicted RBP7.08□□□□□ -1.28
NPHP3-204ENST00000469232 PCNX1Q96RV3 2341 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 A0A1B0GTI1 187 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 TRDV1A0A1B0GX56 115 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 CIB4A0PJX0 185 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 WIPF3A6NGB9 483 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms