RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 TMEM129A0AVI4 362 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 LOC110117498-PIK3R3F6TDL0 507 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 SYNGR3O43761 229 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 IGKV3-15P01624 115 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 CECR9P0C854 216 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 PSKH1P11801 424 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 ATP6V1B1P15313 513 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 PTAFRP25105 342 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 COL8A1P27658 744 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 C21orf33P30042 268 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-216ENST00000468949 OPRL1P41146 370 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 ETV1P50549 477 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 CDH15P55291 814 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 WNT4P56705 351 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 PSMA6P60900 246 aaKnown RBP7.06□□□□□ -1.28
HDAC6-216ENST00000468949 RPS23P62266 143 aaKnown RBP7.06□□□□□ -1.28
HDAC6-216ENST00000468949 ROM1Q03395 351 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF85Q03923 595 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 TFF3Q07654 80 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 MALLQ13021 153 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 SNTB1Q13884 538 aaKnown RBP7.06□□□□□ -1.28
HDAC6-216ENST00000468949 CDSNQ15517 529 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 TBCEQ15813 527 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-216ENST00000468949 GFOD2Q3B7J2 385 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 C3orf36Q3SXR2 165 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 CDONQ4KMG0 1287 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 CCDC92Q53HC0 331 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-216ENST00000468949 BEX5Q5H9J7 111 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 BCL2L15Q5TBC7 163 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 SLC22A25Q6T423 547 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 DRAM2Q6UX65 266 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 MEX3BQ6ZN04 569 aaKnown RBP7.06□□□□□ -1.28
HDAC6-216ENST00000468949 RHOUQ7L0Q8 258 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 SSX6Q7RTT6 188 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF367Q7RTV3 350 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 RFLNBQ8N5W9 214 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 FAM169BQ8N8A8 192 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 OR5L1Q8NGL2 311 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 FGFBP3Q8TAT2 258 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 LINC01560Q8TB33 94 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 FAM222BQ8WU58 562 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 SPRYD4Q8WW59 207 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-216ENST00000468949 PGAM5Q96HS1 289 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 COG8Q96MW5 612 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 WFIKKN1Q96NZ8 548 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 DCLRE1CQ96SD1 692 aaKnown RBP7.06□□□□□ -1.28
HDAC6-216ENST00000468949 DOK1Q99704 481 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 KCNJ15Q99712 375 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 CDCA4Q9BXL8 241 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 COMMD4Q9H0A8 199 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 DUSP21Q9H596 190 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 NOX3Q9HBY0 568 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 ACOXLQ9NUZ1 547 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 PAK1IP1Q9NWT1 392 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-216ENST00000468949 B3GNT2Q9NY97 397 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 SLCO1C1Q9NYB5 712 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 SCOCQ9UIL1 159 aa7.06□□□□□ -1.28
HDAC6-216ENST00000468949 IGHV1-18A0A0C4DH31 117 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 TMEM269A0A1B0GVZ9 245 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF503-AS2A6NEH8 195 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 VSTM5A8MXK1 200 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 J3QRE1 110 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 LCATP04180 440 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 CD3EP07766 207 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 CELA3BP08861 270 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 CCL2P13500 99 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 COX6B1P14854 86 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF14P17017 642 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-216ENST00000468949 PSMB9P28065 219 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 OR12D2P58182 307 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF121P58317 390 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-216ENST00000468949 HIST1H3AP68431 136 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 NAAAQ02083 359 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 NEDD8Q15843 81 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 TIGD6Q17RP2 521 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 HIST2H3PS2Q5TEC6 136 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 OR2G6Q5TZ20 316 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 MYO7BQ6PIF6 2116 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 HIST2H3AQ71DI3 136 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 FAM57BQ71RH2 274 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 KLBQ86Z14 1044 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 ABHD4Q8TB40 342 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 GATAD2BQ8WXI9 593 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 SLC7A6Q92536 515 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 SGCDQ92629 289 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 RORBQ92753 470 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 UFD1Q92890 307 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 ITPKCQ96DU7 683 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 PLPPR2Q96GM1 343 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 C4orf45Q96LM5 186 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 AMELYQ99218 206 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 MRPS26Q9BYN8 205 aaKnown RBP7.05□□□□□ -1.28
HDAC6-216ENST00000468949 OR10A2Q9H208 303 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 OR51B6Q9H340 312 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 ZFAND3Q9H8U3 227 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 PNRC2Q9NPJ4 139 aaKnown RBP7.05□□□□□ -1.28
HDAC6-216ENST00000468949 CRIM1Q9NZV1 1036 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 CRNNQ9UBG3 495 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-216ENST00000468949 MRM2Q9UI43 246 aaKnown RBP7.05□□□□□ -1.28
HDAC6-216ENST00000468949 R4GMQ9 66 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms