RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SNX29P2Q8IUI4 249 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 IL17RDQ8NFM7 739 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 OR4F15Q8NGB8 312 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 SAMD8Q96LT4 415 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 SMR3AQ99954 134 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 SEC61A2Q9H9S3 476 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 ABCB10Q9NRK6 738 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 INIPQ9NRY2 104 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 GDF2Q9UK05 429 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-203ENST00000468565 HIF3AQ9Y2N7 669 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 NDUFS7O75251 213 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 CELA3BP08861 270 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 IFI30P13284 250 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 B4GALT1P15291 398 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 CALCRP30988 508 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 GSG1Q2KHT4 349 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 NXNL2Q5VZ03 156 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 THOC7Q6I9Y2 204 aaKnown RBP12.53□□□□□ -0.4
COL27A1-203ENST00000468565 CLEC9AQ6UXN8 241 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 MYPOPQ86VE0 399 aaPredicted RBP12.53□□□□□ -0.4
COL27A1-203ENST00000468565 GID4Q8IVV7 300 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 PARP16Q8N5Y8 322 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 NUP37Q8NFH4 326 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 FANK1Q8TC84 345 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 ASB10Q8WXI3 467 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 UFD1Q92890 307 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 SMURF1Q9HCE7 757 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 CA10Q9NS85 328 aa12.53□□□□□ -0.4
COL27A1-203ENST00000468565 UBL3O95164 117 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 F13BP05160 661 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 HEXAP06865 529 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 HTR1FP30939 366 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 ACVR1BP36896 505 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 AQP2P41181 271 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 RUNX1T1Q06455 604 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 TNK1Q13470 666 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 TPBGQ13641 420 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 HIST3H3Q16695 136 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 SWI5Q1ZZU3 235 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 LRFN4Q6PJG9 635 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 NOXO1Q8NFA2 376 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 BPIFA2Q96DR5 249 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 MRPL13Q9BYD1 178 aaKnown RBP12.52□□□□□ -0.4
COL27A1-203ENST00000468565 OR52D1Q9H346 318 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 ZNF224Q9NZL3 707 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 FBXL3Q9UKT7 428 aa12.52□□□□□ -0.4
COL27A1-203ENST00000468565 EXOGQ9Y2C4 368 aaKnown RBP12.52□□□□□ -0.4
COL27A1-203ENST00000468565 IGHV2OR16-5A0A0B4J2B6 119 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 MCIDASD6RGH6 385 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 CDC42EP2O14613 210 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 SMAD7O15105 426 aaKnown RBP12.52□□□□□ -0.41
COL27A1-203ENST00000468565 DHHO43323 396 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 TBX1O43435 398 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 APOL3O95236 402 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 HLA-HP01893 362 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 RPS19P39019 145 aaKnown RBP12.52□□□□□ -0.41
COL27A1-203ENST00000468565 CLRN1P58418 232 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 KRR1Q13601 381 aaKnown RBP12.52□□□□□ -0.41
COL27A1-203ENST00000468565 NRN1LQ496H8 165 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 OR2G6Q5TZ20 316 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 TMEM53Q6P2H8 277 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 CXXC5Q7LFL8 322 aaKnown RBP12.52□□□□□ -0.41
COL27A1-203ENST00000468565 LYSMD2Q8IV50 215 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 MOSPD2Q8NHP6 518 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 ZNF75AQ96N20 296 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 FN3KQ9H479 309 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 ZNF442Q9H7R0 627 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 SP140LQ9H930 580 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 TMEM38BQ9NVV0 291 aa12.52□□□□□ -0.41
COL27A1-203ENST00000468565 IL1AP01583 271 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 QDPRP09417 244 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 LIMS3P0CW19 117 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 LIMS4P0CW20 117 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 OR8G3PP0DMU2 310 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 CD79AP11912 226 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 ATP6V1E1P36543 226 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 SERPINF1P36955 418 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 ZNF133P52736 654 aaPredicted RBP12.51□□□□□ -0.41
COL27A1-203ENST00000468565 HGFACQ04756 655 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 RAB35Q15286 201 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 EFNB3Q15768 340 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 MST1LQ2TV78 715 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 ALG10Q5BKT4 473 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 ARMC4Q5T2S8 1044 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 TMPRSS11FQ6ZWK6 438 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 DPPA2Q7Z7J5 298 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 CCDC190Q86UF4 302 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 SLC22A24Q8N4F4 322 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 KLHL36Q8N4N3 616 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 GATAD2BQ8WXI9 593 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 SLC30A2Q9BRI3 323 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 TXNIPQ9H3M7 391 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 NOX3Q9HBY0 568 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 SNTG1Q9NSN8 517 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 TXNL4BQ9NX01 149 aaKnown RBP12.51□□□□□ -0.41
COL27A1-203ENST00000468565 YLPM1P49750 1951 aaKnown RBP12.51□□□□□ -0.41
COL27A1-203ENST00000468565 NSD1Q96L73 2696 aaPredicted RBP12.51□□□□□ -0.41
COL27A1-203ENST00000468565 TLN2Q9Y4G6 2542 aa12.51□□□□□ -0.41
COL27A1-203ENST00000468565 B9A039 149 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 LY6G6DO95868 133 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms