RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 CMC2Q9NRP2 79 aa11.98□□□□□ -0.49
CCHCR1-211ENST00000467553 KIF17Q9P2E2 1029 aa11.98□□□□□ -0.49
CCHCR1-211ENST00000467553 CYB5R1Q9UHQ9 305 aa11.98□□□□□ -0.49
CCHCR1-211ENST00000467553 PLSCR5A0PG75 271 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 FAM183AA6NL82 134 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 F5H5K5 113 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 SPRY3O43610 288 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 TIMM8AO60220 97 aaPredicted RBP11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 ICMTO60725 284 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 ANPEPP15144 967 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 SPI1P17947 270 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 FASP25445 335 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 GGT2P36268 569 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 RPS27P42677 84 aaKnown RBP11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 ZNF81P51508 661 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 PSG7Q13046 419 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 PCGF3Q3KNV8 242 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 FAM209AQ5JX71 171 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 MBNL2Q5VZF2 373 aaKnown RBP11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 IL17RELQ6ZVW7 336 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 ASRGL1Q7L266 308 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 AMIGO2Q86SJ2 522 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 GLCCI1Q86VQ1 547 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 OR5L1Q8NGL2 311 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 OR6K6Q8NGW6 343 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 OR5K1Q8NHB7 308 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 ZFAND2BQ8WV99 257 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 PTP4A1Q93096 173 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 CMBLQ96DG6 245 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 DCLRE1CQ96SD1 692 aaKnown RBP11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 COQ7Q99807 217 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 SOX7Q9BT81 388 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 HDHD2Q9H0R4 259 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 WDR76Q9H967 626 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 DECR2Q9NUI1 292 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 NKIRAS2Q9NYR9 191 aa11.97□□□□□ -0.49
CCHCR1-211ENST00000467553 ZNF593O00488 134 aaPredicted RBP11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 EBAG9O00559 213 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 CDC14BO60729 498 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 NCR1O76036 304 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 HMGN1P05114 100 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 SPARCP09486 303 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 DAPP51397 102 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 SLC25A1P53007 311 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 CDK5Q00535 292 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 ATP6AP1Q15904 470 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 RSPO1Q2MKA7 263 aaPredicted RBP11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 TMEM255AQ5JRV8 349 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 TMEM236Q5W0B7 351 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 NAA40Q86UY6 237 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 LRTOMTQ8WZ04 291 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 MAP6Q96JE9 813 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 COG8Q96MW5 612 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 HCAR1Q9BXC0 346 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 NMNAT2Q9BZQ4 307 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 OR51V1Q9H2C8 321 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 CENPMQ9NSP4 180 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 PTTG3PQ9NZH4 202 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 ATPIF1Q9UII2 106 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 KCNG2Q9UJ96 466 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 METRNQ9UJH8 293 aa11.96□□□□□ -0.49
CCHCR1-211ENST00000467553 NBEAL1Q6ZS30 2694 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 PRR23D1E9PI22 279 aaPredicted RBP11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 G3V2T6 193 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 H3BSA7 217 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 LCATP04180 440 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 PRR23D2P0DMB1 279 aaPredicted RBP11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 PAICSP22234 425 aaKnown RBP11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 TUBG1P23258 451 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 IL2RGP31785 369 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 LIPAP38571 399 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 RGS6P49758 472 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 ENTPD1P49961 510 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 MMP15P51511 669 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 CRISP1P54107 249 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 ECH1Q13011 328 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 HLXQ14774 488 aaPredicted RBP11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 TAF13Q15543 124 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 TRIP10Q15642 601 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 DCXRQ7Z4W1 244 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 YIPF5Q969M3 257 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 APOBEC3DQ96AK3 386 aaPredicted RBP11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 HAVCR1Q96D42 359 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 DUS3LQ96G46 650 aaKnown RBP11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 PLEKHA8Q96JA3 519 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 ATF6BQ99941 703 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 TEX12Q9BXU0 123 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 MSL2Q9HCI7 577 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 TUBG2Q9NRH3 451 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 PAPOLBQ9NRJ5 636 aaKnown RBP11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 CYSLTR2Q9NS75 346 aa11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 PURGQ9UJV8 347 aaKnown RBP11.95□□□□□ -0.5
CCHCR1-211ENST00000467553 SURF4O15260 269 aa11.94□□□□□ -0.5
CCHCR1-211ENST00000467553 IGHV1-46P01743 117 aa11.94□□□□□ -0.5
CCHCR1-211ENST00000467553 ACSM4P0C7M7 580 aa11.94□□□□□ -0.5
CCHCR1-211ENST00000467553 BLVRAP53004 296 aa11.94□□□□□ -0.5
CCHCR1-211ENST00000467553 TPTEP56180 551 aa11.94□□□□□ -0.5
CCHCR1-211ENST00000467553 KLHL12Q53G59 568 aa11.94□□□□□ -0.5
CCHCR1-211ENST00000467553 PLBD1Q6P4A8 553 aa11.94□□□□□ -0.5
CCHCR1-211ENST00000467553 USP51Q70EK9 711 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms