RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 C5orf46Q6UWT4 87 aa13.92□□□□□ -0.18
CHD1L-205ENST00000467213 BOLLQ8N9W6 283 aaKnown RBP13.92□□□□□ -0.18
CHD1L-205ENST00000467213 MAP3K3Q99759 626 aa13.92□□□□□ -0.18
CHD1L-205ENST00000467213 SCAMP1O15126 338 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 OR6A2O95222 327 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 APODP05090 189 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 HRH1P35367 487 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 HSD17B7P56937 341 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 INSM1Q01101 510 aaPredicted RBP13.91□□□□□ -0.18
CHD1L-205ENST00000467213 ZNF585AQ6P3V2 769 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 SLC22A24Q8N4F4 322 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 OR4D6Q8NGJ1 314 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 METTL21AQ8WXB1 218 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 C2orf50Q96LR7 162 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 CCDC3Q9BQI4 270 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 PPP4R1LQ9P1A2 415 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 CACFD1Q9UGQ2 172 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 PCDHGA1Q9Y5H4 931 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 LOC107986453A0A1B0GWG9 222 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 A0A1W2PQD3 144 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 NPIPB13A6NJU9 1138 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 TMEM14DPA8MWL7 114 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 NPIPB4C9JG80 1138 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 HRKO00198 91 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 ACTR1BP42025 376 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 MMP16P51512 607 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 ACTR1AP61163 376 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 SMCO1Q147U7 214 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 OR7A5Q15622 319 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 EIF2S3LQ2VIR3 472 aaKnown RBP13.91□□□□□ -0.18
CHD1L-205ENST00000467213 OR10K2Q6IF99 312 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 KCTD9Q7L273 389 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 SHISA5Q8N114 240 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 JAGN1Q8N5M9 183 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 OR14C36Q8NHC7 312 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 PRTFDC1Q9NRG1 225 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 CUTCQ9NTM9 273 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 OR52A1Q9UKL2 312 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 SLC5A6Q9Y289 635 aa13.91□□□□□ -0.18
CHD1L-205ENST00000467213 FITM1A5D6W6 292 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 LINC00587B1AMM8 73 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 VAMP1P23763 118 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 FPR2P25090 351 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 MNX1P50219 401 aaPredicted RBP13.9□□□□□ -0.18
CHD1L-205ENST00000467213 GLO1Q04760 184 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 EIF3IQ13347 325 aaKnown RBP13.9□□□□□ -0.18
CHD1L-205ENST00000467213 EIF2B1Q14232 305 aaKnown RBP13.9□□□□□ -0.18
CHD1L-205ENST00000467213 MED25Q71SY5 747 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 OR51A2Q8NGJ7 313 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 OR10R2Q8NGX6 335 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 HIST1H2BAQ96A08 127 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 CRB3Q9BUF7 120 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 SLC26A1Q9H2B4 701 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 FLVCR1Q9Y5Y0 555 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 DCDC2BA2VCK2 349 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 FIGNL2A6NMB9 653 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 OIP5O43482 229 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 SGCEO43556 437 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 NPIPB7O75200 414 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 CST4P01036 141 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 IGHV2-5P01817 119 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 SPARCP09486 303 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 HPGDP15428 266 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 RPS27P42677 84 aaKnown RBP13.9□□□□□ -0.18
CHD1L-205ENST00000467213 SNRPEP62304 92 aaKnown RBP13.9□□□□□ -0.18
CHD1L-205ENST00000467213 HGFACQ04756 655 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 UNC119Q13432 240 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 SURF2Q15527 256 aaPredicted RBP13.9□□□□□ -0.18
CHD1L-205ENST00000467213 TMEM268Q5VZI3 342 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 POC1AQ8NBT0 407 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 OR9A4Q8NGU2 314 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 OR10G6Q8NH81 332 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 NECAB3Q96P71 396 aaPredicted RBP13.9□□□□□ -0.18
CHD1L-205ENST00000467213 DEFB118Q96PH6 123 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 MEMO1Q9Y316 297 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 KIF26BQ2KJY2 2108 aa13.9□□□□□ -0.18
CHD1L-205ENST00000467213 COL5A1P20908 1838 aaPredicted RBP13.9□□□□□ -0.18
CHD1L-205ENST00000467213 ZNF217O75362 1048 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 NFYBP25208 207 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 ADH6P28332 368 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 GDI1P31150 447 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 TNFRSF4P43489 277 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 FAM76BQ5HYJ3 339 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 SLC35D2Q76EJ3 337 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 ACBD4Q8NC06 268 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 PHOSPHO1Q8TCT1 267 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 OCSTAMPQ9BR26 566 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 CNTD2Q9H8S5 307 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHD1L-205ENST00000467213 K7EQS6 105 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 SSX5O60225 188 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 HLA-DQA2P01906 255 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 ZNF44P15621 663 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 AKR1C4P17516 323 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 FCARP24071 287 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 FAM3AP98173 230 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 ACKR1Q16570 336 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 Q7L0L9 218 aa13.89□□□□□ -0.19
CHD1L-205ENST00000467213 LHFPL1Q86WI0 220 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms