RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 CNIH4Q9P003 139 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 MED11Q9P086 117 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 GCNT4Q9P109 453 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 METTL1Q9UBP6 276 aaKnown RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF282Q9UDV7 671 aaPredicted RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 CHRNA9Q9UGM1 479 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 SMPXQ9UHP9 88 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 KIF25Q9UIL4 384 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 KLHL21Q9UJP4 597 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ANAPC7Q9UJX3 599 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 STRAPQ9Y3F4 350 aaKnown RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 MRPS18BQ9Y676 258 aaKnown RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 TEX264Q9Y6I9 313 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 U3KQV3 271 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 TANC1Q9C0D5 1861 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 CAMSAP1Q5T5Y3 1602 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 FRMPD1Q5SYB0 1578 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SAMD9LQ8IVG5 1584 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 PRRC2AP48634 2157 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF638Q14966 1978 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 ABCB11O95342 1321 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 A0A1B0GV72 72 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 CIB4A0PJX0 185 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 FABP12A6NFH5 140 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 OR52A4PA6NMU1 304 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 F8WDY8 70 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 KLRC4-KLRK1H3BQV0 150 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 HAS3O00219 553 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SAP18O00422 153 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 BHLHE40O14503 412 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 COPEO14579 308 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 RGS16O15492 202 aaPredicted RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 GGCTO75223 188 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 WBP4O75554 376 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SCGB2A1O75556 95 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 LYPLA1O75608 230 aaPredicted RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 TM7SF2O76062 418 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 B3GAT3O94766 335 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 GADD45GO95257 159 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 CYB5R3P00387 301 aaPredicted RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 C1QBP02746 253 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SCGB1A1P11684 91 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 HSD17B1P14061 328 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 BGNP21810 368 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SLC6A1P30531 599 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SFNP31947 248 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 MAP2K4P45985 399 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 HTR5AP47898 357 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 CCR8P51685 355 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 KCNK10P57789 538 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 VSX2P58304 361 aaPredicted RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 DAOAP59103 153 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 RAB5BP61020 215 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 DYNLL1P63167 89 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 IRF8Q02556 426 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 TLE4Q04727 773 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 CSTF1Q05048 431 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 TAF1AQ15573 450 aaPredicted RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 OR8G1Q15617 311 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 OR1C1Q15619 314 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF79Q15937 498 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 PSG3Q16557 428 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 CARTPTQ16568 116 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 HAGHQ16775 308 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 PHYHD1Q5SRE7 291 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 AVPI1Q5T686 147 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 GPR157Q5UAW9 335 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 PLCXD3Q63HM9 321 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 OR8G2PQ6IF36 304 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 ARCQ7LC44 396 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 RBM45Q8IUH3 476 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SIAH3Q8IW03 269 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 PUSL1Q8N0Z8 303 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 C17orf78Q8N4C9 275 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 GDPD1Q8N9F7 314 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 OR4K14Q8NGD5 310 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 OR5B17Q8NGF7 314 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 OR5T3Q8NGG3 340 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 OR52E1Q8NGJ3 308 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 OR4F5Q8NH21 305 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 OR51A7Q8NH64 312 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 RNASE8Q8TDE3 154 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 CXorf40AQ8TE69 158 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 TBCKQ8TEA7 893 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 GLYATL2Q8WU03 294 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SLC7A6Q92536 515 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 GGHQ92820 318 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 RPL3LQ92901 407 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 CDS1Q92903 461 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 MYLPFQ96A32 169 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 PPWD1Q96BP3 646 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 ULK4Q96C45 1275 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 HAVCR1Q96D42 359 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 RAB3CQ96E17 227 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SMIM12Q96EX1 92 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 MS4A14Q96JA4 679 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 GPR137Q96N19 417 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 LINC00052Q96N35 136 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 S1PR3Q99500 378 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 CHP1Q99653 195 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms