RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 A0A1B0GWA3 101 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 DENRO43583 198 aaKnown RBP12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 SNAP29O95721 258 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 GSTM3P21266 225 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 CBLP22681 906 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 DAPP51397 102 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 RPS6KA3P51812 740 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 MFSD13AQ14CX5 517 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 GPR157Q5UAW9 335 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 Q6ZSV7 163 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 C1orf174Q8IYL3 243 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 RNF113BQ8IZP6 322 aaKnown RBP12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 PAQR4Q8N4S7 273 aaPredicted RBP12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 SLC30A7Q8NEW0 376 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 KCTD12Q96CX2 325 aaKnown RBP12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 OXGR1Q96P68 337 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 DCLRE1CQ96SD1 692 aaKnown RBP12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 FUZQ9BT04 418 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 DGCR6LQ9BY27 220 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 ANKRD60Q9BZ19 345 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 BCL2L14Q9BZR8 327 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 TOR3AQ9H497 397 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 FN3KRPQ9HA64 309 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 DCAF16Q9NXF7 216 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 TMEM5Q9Y2B1 443 aa12.3□□□□□ -0.44
HMGXB4-206ENST00000466438 FTCDNL1E5RQL4 147 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 XPNPEP2O43895 674 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 NPIPB7O75200 414 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 MPIG6BO95866 241 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 ADH4P08319 380 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 COX10Q12887 443 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 PMS2P3Q13401 168 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 IL18R1Q13478 541 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 C1DQ13901 141 aaKnown RBP12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 SLC36A3Q495N2 470 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 ZNF770Q6IQ21 691 aaPredicted RBP12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 PGBD2Q6P3X8 592 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 TTC33Q6PID6 262 aaPredicted RBP12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 MBOAT2Q6ZWT7 520 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 TSPYL5Q86VY4 417 aaPredicted RBP12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 LRRC28Q86X40 367 aaPredicted RBP12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 C20orf196Q8IYI0 205 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 MFSD8Q8NHS3 518 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 GNPDA2Q8TDQ7 276 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 TMEM239Q8WW34 195 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 TFAP2CQ92754 450 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 DACT3Q96B18 629 aaPredicted RBP12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 PHF21AQ96BD5 680 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 FOXB1Q99853 325 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 GABARAPL3Q9BY60 117 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 RIBC2Q9H4K1 309 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 C12orf10Q9HB07 376 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 CDH20Q9HBT6 801 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 B3GAT2Q9NPZ5 323 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 MED31Q9Y3C7 131 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 DOCK11Q5JSL3 2073 aa12.29□□□□□ -0.44
HMGXB4-206ENST00000466438 DNAH9Q9NYC9 4486 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 A0A087WUU8 490 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 PLSCR5A0PG75 271 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 HTR3EA5X5Y0 456 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 DLGAP1O14490 977 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 AHSA1O95433 338 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 GTF2E2P29084 291 aaKnown RBP12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 MMP15P51511 669 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 UCP2P55851 309 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 BTG1P62324 171 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 ESRRGP62508 458 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 SEC23BQ15437 767 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 ZIK1Q3SY52 487 aaPredicted RBP12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 CARD17Q5XLA6 110 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 C1orf94Q6P1W5 598 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 NKAIN4Q8IVV8 208 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 SETD9Q8NE22 299 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 TMEM255BQ8WV15 326 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 RAB40AQ8WXH6 277 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 LRR1Q96L50 414 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 CNBD2Q96M20 576 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 NIPSNAP1Q9BPW8 284 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 SSBP3Q9BWW4 388 aaPredicted RBP12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 SLC19A3Q9BZV2 496 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 TMEM106BQ9NUM4 274 aa12.28□□□□□ -0.44
HMGXB4-206ENST00000466438 ZSCAN5BA6NJL1 495 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 TNFRSF13BO14836 293 aaPredicted RBP12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 SLC16A6O15403 523 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 GASTP01350 101 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 THY1P04216 161 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 PATE4P0C8F1 98 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 CCL2P13500 99 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 FPR3P25089 353 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 ADARB1P78563 741 aaKnown RBP12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 EGR3Q06889 387 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 HNRNPA0Q13151 305 aaKnown RBP12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 DOC2BQ14184 412 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 HERPUD1Q15011 391 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 ZMYND11Q15326 602 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 CD300LDQ6UXZ3 194 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 GDPGP1Q6ZNW5 385 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 Q6ZTK2 550 aa12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 C8orf59Q8N0T1 100 aaPredicted RBP12.27□□□□□ -0.45
HMGXB4-206ENST00000466438 STK35Q8TDR2 534 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms