RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 DIRC2Q96SL1 478 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 TSSK6Q9BXA6 273 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 DGCR6LQ9BY27 220 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 WDR76Q9H967 626 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 ARMC1Q9NVT9 282 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 IGHV2-5P01817 119 aa18.41■□□□□ 0.54
LIME1-203ENST00000465591 ACSM4P0C7M7 580 aa18.41■□□□□ 0.54
LIME1-203ENST00000465591 RAP2AP10114 183 aa18.41■□□□□ 0.54
LIME1-203ENST00000465591 ANOS1P23352 680 aa18.41■□□□□ 0.54
LIME1-203ENST00000465591 RGS6P49758 472 aa18.41■□□□□ 0.54
LIME1-203ENST00000465591 CRMP1Q14194 572 aa18.41■□□□□ 0.54
LIME1-203ENST00000465591 SLC36A3Q495N2 470 aa18.41■□□□□ 0.54
LIME1-203ENST00000465591 TMEM179BQ7Z7N9 219 aa18.41■□□□□ 0.54
LIME1-203ENST00000465591 APOBEC3DQ96AK3 386 aaPredicted RBP18.41■□□□□ 0.54
LIME1-203ENST00000465591 COG8Q96MW5 612 aa18.41■□□□□ 0.54
LIME1-203ENST00000465591 PITX2Q99697 317 aa18.41■□□□□ 0.54
LIME1-203ENST00000465591 NIPSNAP1Q9BPW8 284 aa18.41■□□□□ 0.54
LIME1-203ENST00000465591 CHID1Q9BWS9 393 aa18.41■□□□□ 0.54
LIME1-203ENST00000465591 J3QW42 95 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 GYG2O15488 501 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 THBS2P35442 1172 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 RASSF2P50749 326 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 BNIP1Q12981 228 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 DNAL1Q4LDG9 190 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 PROKR2Q8NFJ6 384 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 OR10G2Q8NGC3 310 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 OR51F2Q8NH61 342 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 CANT1Q8WVQ1 401 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 ITLN1Q8WWA0 313 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 RAB1CQ92928 201 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 LRGUKQ96M69 825 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 ATF6BQ99941 703 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 RBM4Q9BWF3 364 aaKnown RBP18.4■□□□□ 0.54
LIME1-203ENST00000465591 CDADC1Q9BWV3 514 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 C1QTNF5Q9BXJ0 243 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 NMNAT2Q9BZQ4 307 aa18.4■□□□□ 0.54
LIME1-203ENST00000465591 F5H5K5 113 aa18.39■□□□□ 0.53
LIME1-203ENST00000465591 GYPBP06028 91 aa18.39■□□□□ 0.53
LIME1-203ENST00000465591 CLUP10909 449 aa18.39■□□□□ 0.53
LIME1-203ENST00000465591 TRAP1Q12931 704 aaKnown RBP18.39■□□□□ 0.53
LIME1-203ENST00000465591 KRTAP24-1Q3LI83 254 aa18.39■□□□□ 0.53
LIME1-203ENST00000465591 OR2AJ1Q8NGZ0 328 aa18.39■□□□□ 0.53
LIME1-203ENST00000465591 OR2T4Q8NH00 348 aa18.39■□□□□ 0.53
LIME1-203ENST00000465591 SPATA3Q8NHX4 192 aa18.39■□□□□ 0.53
LIME1-203ENST00000465591 SLC7A6OSQ96CW6 309 aaPredicted RBP18.39■□□□□ 0.53
LIME1-203ENST00000465591 TIMD4Q96H15 378 aa18.39■□□□□ 0.53
LIME1-203ENST00000465591 G6PC2Q9NQR9 355 aa18.39■□□□□ 0.53
LIME1-203ENST00000465591 TMEM106BQ9NUM4 274 aa18.39■□□□□ 0.53
LIME1-203ENST00000465591 COMMD3-BMI1R4GMX3 469 aa18.39■□□□□ 0.53
LIME1-203ENST00000465591 H0YL77 283 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 PLPP2O43688 288 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 CST1P01037 141 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 ACSM5Q6NUN0 579 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 IQCF1Q8N6M8 205 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 ZNF511Q8NB15 262 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 OR8G5Q8NG78 346 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 OR10AD1Q8NGE0 317 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 OR5L1Q8NGL2 311 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 OR2V2Q96R30 315 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 SIGLEC11Q96RL6 698 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 FEVQ99581 238 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 GAL3ST1Q99999 423 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 KCNG2Q9UJ96 466 aa18.38■□□□□ 0.53
LIME1-203ENST00000465591 DHRS12A0PJE2 317 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 ISPDA4D126 451 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 C5orf63A6NC05 138 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 AQP12BA6NM10 295 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 MLNRO43193 412 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 AVPP01185 164 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 IGHV2-70P01814 119 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 ZNF823P16415 610 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 SRP14P37108 136 aaKnown RBP18.37■□□□□ 0.53
LIME1-203ENST00000465591 SLC3A1Q07837 685 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 ECH1Q13011 328 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 CD300LDQ6UXZ3 194 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 C1orf229Q6ZS94 237 aaPredicted RBP18.37■□□□□ 0.53
LIME1-203ENST00000465591 AQP12AQ8IXF9 295 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 ZNF283Q8N7M2 679 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 BHLHE23Q8NDY6 225 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 OR2T33Q8NG76 320 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 GIPC3Q8TF64 312 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 TMEM158Q8WZ71 300 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 POP5Q969H6 163 aaKnown RBP18.37■□□□□ 0.53
LIME1-203ENST00000465591 RAB39BQ96DA2 213 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 HCAR1Q9BXC0 346 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 IL19Q9UHD0 177 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 NPTNQ9Y639 398 aa18.37■□□□□ 0.53
LIME1-203ENST00000465591 TRAV20A0A0B4J274 112 aa18.36■□□□□ 0.53
LIME1-203ENST00000465591 IQCF6A8MYZ5 107 aa18.36■□□□□ 0.53
LIME1-203ENST00000465591 EBAG9O00559 213 aa18.36■□□□□ 0.53
LIME1-203ENST00000465591 SPI1P17947 270 aa18.36■□□□□ 0.53
LIME1-203ENST00000465591 TNFSF4P23510 183 aa18.36■□□□□ 0.53
LIME1-203ENST00000465591 SLC25A1P53007 311 aa18.36■□□□□ 0.53
LIME1-203ENST00000465591 GK2Q14410 553 aaPredicted RBP18.36■□□□□ 0.53
LIME1-203ENST00000465591 HS3ST5Q8IZT8 346 aa18.36■□□□□ 0.53
LIME1-203ENST00000465591 ATG16L2Q8NAA4 619 aa18.36■□□□□ 0.53
LIME1-203ENST00000465591 SLC30A2Q9BRI3 323 aa18.36■□□□□ 0.53
LIME1-203ENST00000465591 MED20Q9H944 212 aa18.36■□□□□ 0.53
LIME1-203ENST00000465591 UBAP1Q9NZ09 502 aa18.36■□□□□ 0.53
LIME1-203ENST00000465591 BAIAP2Q9UQB8 552 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms