RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ZNF799Q96GE5 643 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 RDH12Q96NR8 316 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 YIPF3Q9GZM5 350 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 DYNLRB1Q9NP97 96 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 C8orf4Q9NR00 106 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 SLCO1C1Q9NYB5 712 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 F8P00451 2351 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 A0A1W2PPW3 197 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 F5H5K5 113 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 F12P00748 615 aaPredicted RBP17.38■□□□□ 0.37
SKA3-205ENST00000465471 ADRA2AP08913 450 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 PEX2P28328 305 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 GCH1P30793 250 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 OPRL1P41146 370 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 NUDT6P53370 316 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 TPTEP56180 551 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 SELENOVP59797 346 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 SLC25A30Q5SVS4 291 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 FBXW12Q6X9E4 464 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 ZCCHC24Q8N2G6 241 aaKnown RBP17.38■□□□□ 0.37
SKA3-205ENST00000465471 PACRGLQ8N7B6 248 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 KCNJ15Q99712 375 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 COPS4Q9BT78 406 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 MS4A5Q9H3V2 200 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 DCLRE1BQ9H816 532 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 TAAR3PQ9P1P4 343 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 KLHDC2Q9Y2U9 406 aa17.38■□□□□ 0.37
SKA3-205ENST00000465471 LYNP07948 512 aa17.37■□□□□ 0.37
SKA3-205ENST00000465471 ALOX5APP20292 161 aa17.37■□□□□ 0.37
SKA3-205ENST00000465471 KITLGP21583 273 aa17.37■□□□□ 0.37
SKA3-205ENST00000465471 ANOS1P23352 680 aa17.37■□□□□ 0.37
SKA3-205ENST00000465471 MMP15P51511 669 aa17.37■□□□□ 0.37
SKA3-205ENST00000465471 SNRPGP62308 76 aaKnown RBP17.37■□□□□ 0.37
SKA3-205ENST00000465471 GRB2P62993 217 aaKnown RBP17.37■□□□□ 0.37
SKA3-205ENST00000465471 PSG7Q13046 419 aa17.37■□□□□ 0.37
SKA3-205ENST00000465471 OGFRL1Q5TC84 451 aaPredicted RBP17.37■□□□□ 0.37
SKA3-205ENST00000465471 LPCAT4Q643R3 524 aa17.37■□□□□ 0.37
SKA3-205ENST00000465471 DRAM2Q6UX65 266 aa17.37■□□□□ 0.37
SKA3-205ENST00000465471 NAA40Q86UY6 237 aa17.37■□□□□ 0.37
SKA3-205ENST00000465471 UBE2FQ969M7 185 aa17.37■□□□□ 0.37
SKA3-205ENST00000465471 ZNF582Q96NG8 517 aaPredicted RBP17.37■□□□□ 0.37
SKA3-205ENST00000465471 CNN2Q99439 309 aaKnown RBP17.37■□□□□ 0.37
SKA3-205ENST00000465471 VRK1Q99986 396 aaPredicted RBP17.37■□□□□ 0.37
SKA3-205ENST00000465471 RAB1BQ9H0U4 201 aa17.37■□□□□ 0.37
SKA3-205ENST00000465471 ADGRL4Q9HBW9 690 aa17.37■□□□□ 0.37
SKA3-205ENST00000465471 CENPMQ9NSP4 180 aa17.37■□□□□ 0.37
SKA3-205ENST00000465471 SMPD3Q9NY59 655 aaPredicted RBP17.37■□□□□ 0.37
SKA3-205ENST00000465471 H2AFY2Q9P0M6 372 aaPredicted RBP17.37■□□□□ 0.37
SKA3-205ENST00000465471 WARS2Q9UGM6 360 aaKnown RBP17.37■□□□□ 0.37
SKA3-205ENST00000465471 SLC16A6O15403 523 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 MRPL3P09001 348 aaKnown RBP17.36■□□□□ 0.37
SKA3-205ENST00000465471 GABRB1P18505 474 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 HTR1FP30939 366 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 MOGQ16653 247 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 NKPD1Q17RQ9 610 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 CLEC12BQ2HXU8 276 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 OR5L1Q8NGL2 311 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 NEU4Q8WWR8 484 aaPredicted RBP17.36■□□□□ 0.37
SKA3-205ENST00000465471 HAVCR1Q96D42 359 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 Q96MF0 132 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 TMUB1Q9BVT8 246 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 DLL4Q9NR61 685 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 FAM118AQ9NWS6 357 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 IMPAD1Q9NX62 359 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 CGGBP1Q9UFW8 167 aaPredicted RBP17.36■□□□□ 0.37
SKA3-205ENST00000465471 GPR160Q9UJ42 338 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 GMPPBQ9Y5P6 360 aa17.36■□□□□ 0.37
SKA3-205ENST00000465471 SSX4O60224 188 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 LY6HO94772 140 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 NAT2P11245 290 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 RAC2P15153 192 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 SLC15A1P46059 708 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 TMED1Q13445 227 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 LRRC36Q1X8D7 754 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 ALKBH6Q3KRA9 238 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 SPATC1Q76KD6 591 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 PRSS45Q7RTY3 260 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 GTF3AQ92664 365 aaKnown RBP17.35■□□□□ 0.37
SKA3-205ENST00000465471 TPK1Q9H3S4 243 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 DNAJC27Q9NZQ0 273 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 LAMP5Q9UJQ1 280 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 PURGQ9UJV8 347 aaKnown RBP17.35■□□□□ 0.37
SKA3-205ENST00000465471 COPS3Q9UNS2 423 aa17.35■□□□□ 0.37
SKA3-205ENST00000465471 LOC100130705A0A1B0GUX0 176 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 C17orf100A8MU93 164 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 LCATP04180 440 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 ADH4P08319 380 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 SBK2P0C263 348 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 PRKXP51817 358 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 HCCSP53701 268 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 HLXQ14774 488 aaPredicted RBP17.34■□□□□ 0.37
SKA3-205ENST00000465471 TAF13Q15543 124 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 OCLNQ16625 522 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 SNAI3Q3KNW1 292 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 ZNF525Q8N782 197 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 THEM6Q8WUY1 208 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 SNX33Q8WV41 574 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 CMBLQ96DG6 245 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 MNTQ99583 582 aa17.34■□□□□ 0.37
SKA3-205ENST00000465471 NKIRAS2Q9NYR9 191 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms