RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PDCD5O14737 125 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 RGS5O15539 181 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 UPK3AO75631 287 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 CNOT4O95628 575 aaKnown RBP12.14□□□□□ -0.47
HDAC6-215ENST00000465457 HPNP05981 417 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 UCHL1P09936 223 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 OR8G3PP0DMU2 310 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 PTBP1P26599 531 aaKnown RBP eCLIP12.14□□□□□ -0.47
HDAC6-215ENST00000465457 CALRP27797 417 aaKnown RBP12.14□□□□□ -0.47
HDAC6-215ENST00000465457 LAP3P28838 519 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 SHC1P29353 583 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 SORDQ00796 357 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 ALKBH1Q13686 389 aaKnown RBP12.14□□□□□ -0.47
HDAC6-215ENST00000465457 HIST3H3Q16695 136 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 RGS21Q2M5E4 152 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 ZMAT1Q5H9K5 638 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 LIPNQ5VXI9 398 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 HBMQ6B0K9 141 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 LYPD4Q6UWN0 246 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 RHOUQ7L0Q8 258 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 KDM8Q8N371 416 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 SYT14Q8NB59 555 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 THEM6Q8WUY1 208 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 NSMAFQ92636 917 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 TXNDC15Q96J42 360 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 KCNS3Q9BQ31 491 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 CCDC32Q9BV29 185 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 TPK1Q9H3S4 243 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 MRPL22Q9NWU5 206 aaKnown RBP12.14□□□□□ -0.47
HDAC6-215ENST00000465457 PAQR5Q9NXK6 330 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-215ENST00000465457 FOXD3Q9UJU5 478 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-215ENST00000465457 RCE1Q9Y256 329 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 COA3Q9Y2R0 106 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-215ENST00000465457 KLHDC2Q9Y2U9 406 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 GRIP1Q9Y3R0 1128 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 UGT2A1Q9Y4X1 527 aa12.14□□□□□ -0.47
HDAC6-215ENST00000465457 J3QRK9 145 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 ENPP1P22413 925 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 ZNF133P52736 654 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-215ENST00000465457 RIDAP52758 137 aaKnown RBP12.13□□□□□ -0.47
HDAC6-215ENST00000465457 GFRA1P56159 465 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 DBPQ10586 325 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-215ENST00000465457 EIF2B1Q14232 305 aaKnown RBP12.13□□□□□ -0.47
HDAC6-215ENST00000465457 SLC17A1Q14916 467 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 KCNMB1Q16558 191 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 PLXDC2Q6UX71 529 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 UNQ9370/PRO34162Q6UXP9 181 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 KRT77Q7Z794 578 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 OR5AK2Q8NH90 309 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 OR2V1Q8NHB1 315 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 RNF128Q8TEB7 428 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 CPNE4Q96A23 557 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-215ENST00000465457 LRRC46Q96FV0 321 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 DCLRE1CQ96SD1 692 aaKnown RBP12.13□□□□□ -0.47
HDAC6-215ENST00000465457 TTTY10Q9BZA0 68 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 SLITRK2Q9H156 845 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 JKAMPQ9P055 326 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 ZNF629Q9UEG4 869 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-215ENST00000465457 PCNX3Q9H6A9 2034 aa12.13□□□□□ -0.47
HDAC6-215ENST00000465457 A0A0J9YW62 118 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 WIPF1O43516 503 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 TRAPPC6AO75865 159 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 DCTDP32321 178 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 GUCA1AP43080 201 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-215ENST00000465457 CARD18P57730 90 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 FMODQ06828 376 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 FOXF2Q12947 444 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 MEP1BQ16820 701 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 Q499Y3 187 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 HSD17B12Q53GQ0 312 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 METAP1DQ6UB28 335 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-215ENST00000465457 PRSS57Q6UWY2 283 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 CREB3L2Q70SY1 520 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 YRDCQ86U90 279 aaKnown RBP12.12□□□□□ -0.47
HDAC6-215ENST00000465457 GGNQ86UU5 652 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 OR9K2Q8NGE7 335 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 OR2G2Q8NGZ5 317 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 GPR148Q8TDV2 347 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 C4orf45Q96LM5 186 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 CCL19Q99731 98 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 MRI1Q9BV20 369 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 ABHD6Q9BV23 337 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 NIPAL2Q9H841 368 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 UBTD1Q9HAC8 227 aa12.12□□□□□ -0.47
HDAC6-215ENST00000465457 PRR32B1ATL7 298 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 EIF1AYO14602 144 aaKnown RBP12.11□□□□□ -0.47
HDAC6-215ENST00000465457 TNFSF11O14788 317 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 UPK1BO75841 260 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 RPP14O95059 124 aaKnown RBP12.11□□□□□ -0.47
HDAC6-215ENST00000465457 ZFPL1O95159 310 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 OPN1LWP04000 364 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 CLEC2LP0C7M8 214 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 RAB3BP20337 219 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 TNFSF8P32971 234 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 TIMP3P35625 211 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 PSMB10P40306 273 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 CSNK1A1P48729 337 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 SUCLG1P53597 346 aaKnown RBP12.11□□□□□ -0.47
HDAC6-215ENST00000465457 CLDN17P56750 224 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 RPS11P62280 158 aaKnown RBP eCLIP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms