RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 TRAPPC6BQ86SZ2 158 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 LYPD6Q86Y78 171 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 UEVLDQ8IX04 471 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 OR52N4Q8NGI2 321 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 AQP3Q92482 292 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 SLC6A7Q99884 636 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 PRRT1Q99946 306 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 SEC61A2Q9H9S3 476 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 PFDN2Q9UHV9 154 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 POM121CA8CG34 1229 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 HLA-AP01891 365 aaKnown RBP16.31■□□□□ 0.2
SYNE4-204ENST00000465425 NMBP08949 121 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 ZNF735P0CB33 412 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 MSX1P28360 303 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 DHRS2Q13268 280 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 TMPRSS9Q7Z410 1059 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 GPAT4Q86UL3 456 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 FJX1Q86VR8 437 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 OR1M1Q8NGA1 313 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 MYOZ1Q9NP98 299 aaPredicted RBP16.31■□□□□ 0.2
SYNE4-204ENST00000465425 FANCFQ9NPI8 374 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 NOP16Q9Y3C1 178 aaKnown RBP16.31■□□□□ 0.2
SYNE4-204ENST00000465425 TMEM200CA6NKL6 621 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 RAB27BO00194 218 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 TIAF1O95411 115 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 RAB3AP20336 220 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 CD34P28906 385 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 AGTR1P30556 359 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 CXADRP78310 365 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 DCDP81605 110 aaKnown RBP16.3■□□□□ 0.2
SYNE4-204ENST00000465425 FGL1Q08830 312 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 PLPPR5Q32ZL2 321 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 ZNF260Q3ZCT1 412 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 PHF19Q5T6S3 580 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 OR2AJ1Q8NGZ0 328 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 ADAT3Q96EY9 351 aaPredicted RBP16.3■□□□□ 0.2
SYNE4-204ENST00000465425 CXorf58Q96LI9 332 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 UQCC2Q9BRT2 126 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 EDEM2Q9BV94 578 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 TMEM185BQ9H7F4 350 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 B3GAT1Q9P2W7 334 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 FBXO4Q9UKT5 387 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 LOC100509620A0A075B734 347 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 CPED1A4D0V7 1026 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 BPNT1O95861 308 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 LY6G6FQ5SQ64 297 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 RGS7BPQ6MZT1 257 aaPredicted RBP16.3■□□□□ 0.2
SYNE4-204ENST00000465425 C3orf33Q6P1S2 294 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 ZNF574Q6ZN55 896 aaPredicted RBP16.3■□□□□ 0.2
SYNE4-204ENST00000465425 C17orf107Q6ZR85 190 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 COMMD2Q86X83 199 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 OR13C8Q8NGS7 320 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 OR13C9Q8NGT0 318 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 CMBLQ96DG6 245 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 PDCD10Q9BUL8 212 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 PTGES2Q9H7Z7 377 aa16.3■□□□□ 0.2
SYNE4-204ENST00000465425 UBE2ZQ9H832 354 aaPredicted RBP16.3■□□□□ 0.2
SYNE4-204ENST00000465425 ETV2O00321 342 aaPredicted RBP16.29■□□□□ 0.2
SYNE4-204ENST00000465425 SMAD9O15198 467 aaKnown RBP16.29■□□□□ 0.2
SYNE4-204ENST00000465425 SCGNO76038 276 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 SPDEFO95238 335 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 IGHG1P01857 330 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 OPN1LWP04000 364 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 ZNF20P17024 532 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 CLDN6P56747 220 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 TAF13Q15543 124 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 AWAT2Q6E213 333 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 ZNF546Q86UE3 836 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 SLC51BQ86UW2 128 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 SPEM1Q8N4L4 309 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 OR10G3Q8NGC4 313 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 C1QTNF6Q9BXI9 259 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 MRPL13Q9BYD1 178 aaKnown RBP16.29■□□□□ 0.2
SYNE4-204ENST00000465425 IFT46Q9NQC8 304 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 MED9Q9NWA0 146 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 PISDQ9UG56 409 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 FBXL2Q9UKC9 423 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 RHBDD3Q9Y3P4 386 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 HRH3Q9Y5N1 445 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 WIF1Q9Y5W5 379 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 MFSD2BA6NFX1 497 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 EFNA2O43921 213 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 ZFAND5O76080 213 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 ERCC1P07992 297 aaPredicted RBP16.29■□□□□ 0.2
SYNE4-204ENST00000465425 CALCRP30988 508 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 UNC119Q13432 240 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 LPCAT3Q6P1A2 487 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 CPEB2Q7Z5Q1 589 aaKnown RBP16.29■□□□□ 0.2
SYNE4-204ENST00000465425 PAQR4Q8N4S7 273 aaPredicted RBP16.29■□□□□ 0.2
SYNE4-204ENST00000465425 OR5M8Q8NGP6 311 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 OR6K3Q8NGY3 331 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 ZBTB8AQ96BR9 441 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 SLC2A8Q9NY64 477 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 MYOTQ9UBF9 498 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 RARRES3Q9UL19 164 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 PLEKHA6Q9Y2H5 1048 aa16.29■□□□□ 0.2
SYNE4-204ENST00000465425 ZNF878C9JN71 531 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 OR2J2O76002 312 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 ZP3P21754 424 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 SLC25A53Q5H9E4 307 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms