RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ZNF33AQ06730 810 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 SCRN3Q0VDG4 424 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 SELENBP1Q13228 472 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 ART3Q13508 389 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 GNMTQ14749 295 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 RGS21Q2M5E4 152 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 LYPD2Q6UXB3 125 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 CERS6Q6ZMG9 384 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 TMPRSS11AQ6ZMR5 421 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 NIPA1Q7RTP0 329 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 SELENOHQ8IZQ5 122 aaKnown RBP3.4□□□□□ -1.87
PTCD3-205ENST00000464541 ZNF561Q8N587 486 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 Q8N976 141 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 ACOT4Q8N9L9 421 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 LRRC75AQ8NAA5 344 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 PLPPR1Q8TBJ4 325 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 TMEM239Q8WW34 195 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 RNF170Q96K19 258 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 ATP5SQ99766 215 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 API5Q9BZZ5 524 aaKnown RBP3.4□□□□□ -1.87
PTCD3-205ENST00000464541 RACGAP1Q9H0H5 632 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 PIGUQ9H490 435 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 MS4A12Q9NXJ0 267 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 EURLQ9NYK6 297 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 HMGXB4Q9UGU5 601 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 ADCY9O60503 1353 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 A0A1W2PQ67 120 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 SMIM23A6NLE4 172 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 ERVV-1B6SEH8 477 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 H7C0C1 242 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 SIVA1O15304 175 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 ANGPTL7O43827 346 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 TOM1O60784 492 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 SCN2BO60939 215 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 ERLIN2O94905 339 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 VAPBO95292 243 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 CST4P01036 141 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 RETP07949 1114 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 GKN3PP0CG01 181 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 SMIM10L1P0DMW3 83 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 IGHV3-43DP0DP04 118 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 BGNP21810 368 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 CFHR2P36980 270 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 GSSP48637 474 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 UBE2AP49459 152 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 TMED10P49755 219 aaKnown RBP3.39□□□□□ -1.87
PTCD3-205ENST00000464541 ACVR1Q04771 509 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 IFFO1Q0D2I5 559 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 PIGHQ14442 188 aaPredicted RBP3.39□□□□□ -1.87
PTCD3-205ENST00000464541 SF3A2Q15428 464 aaKnown RBP3.39□□□□□ -1.87
PTCD3-205ENST00000464541 UAP1Q16222 522 aaPredicted RBP3.39□□□□□ -1.87
PTCD3-205ENST00000464541 PRMT9Q6P2P2 845 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 SPESP1Q6UW49 350 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 ABHD12BQ7Z5M8 362 aaPredicted RBP3.39□□□□□ -1.87
PTCD3-205ENST00000464541 IQCKQ8N0W5 287 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 TPRX1Q8N7U7 411 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 NECAP1Q8NC96 275 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 OR5T1Q8NG75 326 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 TCP10LQ8TDR4 215 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 PYROXD1Q8WU10 500 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 SMIM10Q96HG1 83 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 CTRCQ99895 268 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 C7orf50Q9BRJ6 194 aaKnown RBP3.39□□□□□ -1.87
PTCD3-205ENST00000464541 UPF3BQ9BZI7 483 aaKnown RBP3.39□□□□□ -1.87
PTCD3-205ENST00000464541 SHCBP1LQ9BZQ2 653 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 UCK2Q9BZX2 261 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 ZNF282Q9UDV7 671 aaPredicted RBP3.39□□□□□ -1.87
PTCD3-205ENST00000464541 ATPIF1Q9UII2 106 aa3.39□□□□□ -1.87
PTCD3-205ENST00000464541 PUS1Q9Y606 427 aaKnown RBP eCLIP3.39□□□□□ -1.87
PTCD3-205ENST00000464541 LRPPRCP42704 1394 aaKnown RBP3.38□□□□□ -1.87
PTCD3-205ENST00000464541 A0A1B0GTI1 187 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 A0A1B0GW15 77 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 TMEM210A6NLX4 147 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 ZNF99A8MXY4 864 aaPredicted RBP3.38□□□□□ -1.87
PTCD3-205ENST00000464541 RNASEK-C17orf49H0YIS7 233 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 LIN7AO14910 233 aaPredicted RBP3.38□□□□□ -1.87
PTCD3-205ENST00000464541 ZW10O43264 779 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 XRCC2O43543 280 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 SLC19A2O60779 497 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 NDUFS6O75380 124 aaKnown RBP3.38□□□□□ -1.87
PTCD3-205ENST00000464541 CSF3P09919 207 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 UBTFL1P0CB47 393 aaPredicted RBP3.38□□□□□ -1.87
PTCD3-205ENST00000464541 PSMB6P28072 239 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 HOXA6P31267 233 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 ARR3P36575 388 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 P2RY2P41231 377 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 CSKP41240 450 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 ADARB1P78563 741 aaKnown RBP3.38□□□□□ -1.87
PTCD3-205ENST00000464541 FADDQ13158 208 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 RSPO1Q2MKA7 263 aaPredicted RBP3.38□□□□□ -1.87
PTCD3-205ENST00000464541 PPM1LQ5SGD2 360 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 FAM151BQ6UXP7 276 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 DCXRQ7Z4W1 244 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 LRRC6Q86X45 466 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 CRLF3Q8IUI8 442 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 SYS1Q8N2H4 156 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 LIX1Q8N485 282 aa3.38□□□□□ -1.87
PTCD3-205ENST00000464541 CYB561D1Q8N8Q1 229 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms