RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 C3orf33Q6P1S2 294 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 B3GLCTQ6Y288 498 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TMPPEQ6ZT21 453 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 Q6ZTK2 550 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 LINGO2Q7L985 606 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 FAM122BQ7Z309 247 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PM20D2Q8IYS1 436 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PAQR4Q8N4S7 273 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ZIC4Q8N9L1 334 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ATG16L2Q8NAA4 619 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 MAPK1IP1LQ8NDC0 245 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 BBS1Q8NFJ9 593 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 OR2V1Q8NHB1 315 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 FNDC9Q8TBE3 224 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PIGXQ8TBF5 258 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 FANK1Q8TC84 345 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 GNPDA2Q8TDQ7 276 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 APH1BQ8WW43 257 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TMEM234Q8WY98 164 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ABTB1Q969K4 478 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 MPP4Q96JB8 637 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 Q96M85 177 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ZFP3Q96NJ6 502 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF385AQ96PM9 386 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TSPAN32Q96QS1 320 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PIGQQ9BRB3 760 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 EMC6Q9BV81 110 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 SFXN3Q9BWM7 321 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 GABARAPL3Q9BY60 117 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 POLR2J2Q9GZM3 115 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 POLR2J3Q9H1A7 115 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PIGMQ9H3S5 423 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ANKRD19PQ9H560 264 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ARMC7Q9H6L4 198 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 EXO5Q9H790 373 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PTGES2Q9H7Z7 377 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 MED20Q9H944 212 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 UBTD1Q9HAC8 227 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 C12orf10Q9HB07 376 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF226Q9NYT6 803 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 UBAP1Q9NZ09 502 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 CAMK2AQ9UQM7 478 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 GPR52Q9Y2T5 361 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 MED31Q9Y3C7 131 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 MRPS18CQ9Y3D5 142 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ROS1P08922 2347 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 A0A096LNT2 108 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 ARRDC5A6NEK1 342 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 FAM183AA6NL82 134 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 BLOC1S5-TXNDC5H3BN57 136 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 PRKYO43930 277 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 TNFSF13O75888 250 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 SAGP10523 405 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-204ENST00000463622 GABRB1P18505 474 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 ANOS1P23352 680 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 POU1F1P28069 291 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 VHLP40337 213 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 CRISP1P54107 249 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 NR1H2P55055 460 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 FMODQ06828 376 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 FAM27E3Q08E93 113 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 GINS1Q14691 196 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 PON3Q15166 354 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 PTGES3Q15185 160 aaKnown RBP3.12□□□□□ -1.91
SCFD1-204ENST00000463622 CLEC12BQ2HXU8 276 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 FAM69AQ5T7M9 428 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 C12orf73Q69YU5 71 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 HBMQ6B0K9 141 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 RASSF6Q6ZTQ3 369 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 NUFIP2Q7Z417 695 aaKnown RBP3.12□□□□□ -1.91
SCFD1-204ENST00000463622 GCNT2Q8N0V5 402 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 SVOPLQ8N434 492 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 C10orf53Q8N6V4 93 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF611Q8N823 705 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 CYB561A3Q8NBI2 242 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 SDR9C7Q8NEX9 313 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 OR5J2Q8NH18 312 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 MFSD8Q8NHS3 518 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF519Q8TB69 540 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 SMAP2Q8WU79 429 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-204ENST00000463622 NUDCD2Q8WVJ2 157 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 LIPHQ8WWY8 451 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 HDAC2Q92769 488 aaKnown RBP3.12□□□□□ -1.91
SCFD1-204ENST00000463622 OSTF1Q92882 214 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 NRBF2Q96F24 287 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 PIK3IP1Q96FE7 263 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 URB1-AS1Q96HZ7 61 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF570Q96NI8 536 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 FOXN4Q96NZ1 517 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 TSSK2Q96PF2 358 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 DDOQ99489 341 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 PITX2Q99697 317 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 C9orf16Q9BUW7 83 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 SF3B5Q9BWJ5 86 aaKnown RBP3.12□□□□□ -1.91
SCFD1-204ENST00000463622 TSSK6Q9BXA6 273 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 POTEKPQ9BYX7 375 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 KLHL4Q9C0H6 718 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 CXorf56Q9H5V9 222 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 ESRP2Q9H6T0 727 aaKnown RBP3.12□□□□□ -1.91
SCFD1-204ENST00000463622 YY1AP1Q9H869 796 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms