RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 TEX19Q8NA77 164 aa10.45□□□□□ -0.74
NPHP4-204ENST00000460696 ZC3HAV1LQ96H79 300 aaKnown RBP10.45□□□□□ -0.74
NPHP4-204ENST00000460696 SLC25A21Q9BQT8 299 aaPredicted RBP10.45□□□□□ -0.74
NPHP4-204ENST00000460696 TINAGL1Q9GZM7 467 aaPredicted RBP10.45□□□□□ -0.74
NPHP4-204ENST00000460696 TAS2R5Q9NYW4 299 aa10.45□□□□□ -0.74
NPHP4-204ENST00000460696 PIEZO2Q9H5I5 2752 aa10.45□□□□□ -0.74
NPHP4-204ENST00000460696 RAD51DO75771 328 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 IGHV3-9P01782 118 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 GAAP10253 952 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 MSX1P28360 303 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 NPY4RP50391 375 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 MYBPHQ13203 477 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 OR1M1Q8NGA1 313 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 KCNG3Q8TAE7 436 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 STK35Q8TDR2 534 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 TSNAXQ99598 290 aaKnown RBP10.44□□□□□ -0.74
NPHP4-204ENST00000460696 RGS11O94810 467 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 HLA-DOBP13765 273 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 NAGAP17050 411 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 PI3P19957 117 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 LAP3P28838 519 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 MTCP1P56278 107 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 MFAP5Q13361 173 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 YRDCQ86U90 279 aaKnown RBP10.44□□□□□ -0.74
NPHP4-204ENST00000460696 FJX1Q86VR8 437 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 ZNF565Q8N9K5 539 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 ZSCAN1Q8NBB4 408 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 OR2AK2Q8NG84 335 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 OR11H7Q8NGC8 314 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 RNF128Q8TEB7 428 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 CMBLQ96DG6 245 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 CCDC74BQ96LY2 380 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 KCNJ15Q99712 375 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 OR10A2Q9H208 303 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 OR51B6Q9H340 312 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 ASF1BQ9NVP2 202 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 PARPBPQ9NWS1 579 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 ZNF254O75437 659 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 TNFSF15O95150 251 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 SYNGR4O95473 234 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 GIPP09681 153 aaPredicted RBP10.44□□□□□ -0.74
NPHP4-204ENST00000460696 EIF1P41567 113 aaKnown RBP10.44□□□□□ -0.74
NPHP4-204ENST00000460696 SEC61A1P61619 476 aaKnown RBP10.44□□□□□ -0.74
NPHP4-204ENST00000460696 PLA1AQ53H76 456 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 ABHD17BQ5VST6 288 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 ADGRG3Q86Y34 549 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 TMEM185AQ8NFB2 350 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 ZNRF4Q8WWF5 429 aa10.44□□□□□ -0.74
NPHP4-204ENST00000460696 EXOSC3Q9NQT5 275 aaKnown RBP10.44□□□□□ -0.74
NPHP4-204ENST00000460696 FBXO9Q9UK97 447 aaPredicted RBP10.44□□□□□ -0.74
NPHP4-204ENST00000460696 GJE1A6NN92 205 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 STMND1H3BQB6 276 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 ICMTO60725 284 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 SCO1O75880 301 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 GNB3P16520 340 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 CX3CR1P49238 355 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 PLP2Q04941 152 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 CLVS2Q5SYC1 327 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 ZBTB37Q5TC79 503 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 LIX1LQ8IVB5 337 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 BATF2Q8N1L9 274 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 AMELYQ99218 206 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 PBOV1Q9GZY1 135 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 GDF2Q9UK05 429 aaPredicted RBP10.43□□□□□ -0.74
NPHP4-204ENST00000460696 ZNF705EA8MWA4 302 aaPredicted RBP10.43□□□□□ -0.74
NPHP4-204ENST00000460696 PRR33A8MZF0 331 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 PLPP3O14495 311 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 RRP8O43159 456 aaKnown RBP10.43□□□□□ -0.74
NPHP4-204ENST00000460696 HSPA12AO43301 675 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 PMS2P2O95744 297 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 ANKRD34CP0C6C1 535 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 PPP3CBP16298 524 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 TCN2P20062 427 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 TEX261Q6UWH6 196 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 UNQ6126/PRO20091Q6UXV3 157 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 NHLRC1Q6VVB1 395 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 NR2C2APQ86WQ0 139 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 OR51A2Q8NGJ7 313 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 PIGCQ92535 297 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 SLCO5A1Q9H2Y9 848 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 DLL4Q9NR61 685 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 EMC3Q9P0I2 261 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 NUP50Q9UKX7 468 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 LSM5Q9Y4Y9 91 aaKnown RBP10.43□□□□□ -0.74
NPHP4-204ENST00000460696 U3KQ87 197 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 ATRXP46100 2492 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 A0A1B0GV50 99 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 H7C417 338 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 CTAG2O75638 210 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 ABOP16442 354 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 HTR5AP47898 357 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 PER3P56645 1201 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 BTN1A1Q13410 526 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 OR52W1Q6IF63 320 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 ZNF585AQ6P3V2 769 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 AAED1Q7RTV5 226 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 CDC20BQ86Y33 519 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 KMT5CQ86Y97 462 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 SPAG16Q8N0X2 631 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 FLVCR1-AS1Q8TAF5 88 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms