RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 LHX9Q9NQ69 397 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 KLK12Q9UKR0 248 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 TBX21Q9UL17 535 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 RAB26Q9ULW5 256 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 PRELID1Q9Y255 219 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 CBY1Q9Y3M2 126 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 KCNE3Q9Y6H6 103 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 SBNO1A3KN83 1393 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 ASTN1O14525 1302 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 KCNE1BA0A087WTH5 132 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 IGHV3-74A0A0B4J1X5 117 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 IGHV5-51A0A0C4DH38 117 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 GOLGA8TH3BQL2 631 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 H7C0C1 242 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 M0R3G1 203 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 SCAMP2O15127 329 aaKnown RBP3.48□□□□□ -1.85
CCDC50-203ENST00000460064 AIREO43918 545 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 RDH16O75452 317 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 TLX1NBP0CAT3 122 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 PRKACAP17612 351 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 PTNP21246 168 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 LCN1P31025 176 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 B2MP61769 119 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 SLAQ13239 276 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 RCAN2Q14206 197 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 BCL2A1Q16548 175 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 SMUG1Q53HV7 270 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 UBE2UQ5VVX9 321 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 GPR107Q5VW38 600 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 PLET1Q6UQ28 207 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 C12orf54Q6X4T0 127 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 ASCC1Q8N9N2 400 aaKnown RBP3.48□□□□□ -1.85
CCDC50-203ENST00000460064 NOXO1Q8NFA2 376 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 CDC26Q8NHZ8 85 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 CCDC12Q8WUD4 166 aaPredicted RBP3.48□□□□□ -1.85
CCDC50-203ENST00000460064 CYTH2Q99418 400 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 VCXQ9H320 206 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 FBXO44Q9H4M3 255 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 TRMT112Q9UI30 125 aaKnown RBP3.48□□□□□ -1.85
CCDC50-203ENST00000460064 SLC22A14Q9Y267 594 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 ATP6V1DQ9Y5K8 247 aa3.48□□□□□ -1.85
CCDC50-203ENST00000460064 UBN2Q6ZU65 1347 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 TRAV25A0A0B4J276 109 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 TRDMT1O14717 391 aaKnown RBP3.47□□□□□ -1.85
CCDC50-203ENST00000460064 SLC9A3R1O14745 358 aaPredicted RBP3.47□□□□□ -1.85
CCDC50-203ENST00000460064 SNAI2O43623 268 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 CRTAPO75718 401 aaPredicted RBP3.47□□□□□ -1.85
CCDC50-203ENST00000460064 SLC25A14O95258 325 aaPredicted RBP3.47□□□□□ -1.85
CCDC50-203ENST00000460064 LSM8O95777 96 aaKnown RBP3.47□□□□□ -1.85
CCDC50-203ENST00000460064 EIF4EP06730 217 aaKnown RBP3.47□□□□□ -1.85
CCDC50-203ENST00000460064 CT45A6P0DMU7 189 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 CT45A5P0DMU8 189 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 CT45A7P0DMV0 189 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 RPS9P46781 194 aaKnown RBP3.47□□□□□ -1.85
CCDC50-203ENST00000460064 RAP1AP62834 184 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 ARG2P78540 354 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 BASP1P80723 227 aaKnown RBP3.47□□□□□ -1.85
CCDC50-203ENST00000460064 LRRC63Q05C16 580 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 ITIH4Q14624 930 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 QPRTQ15274 297 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 CT45A1Q5HYN5 189 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 METTL21CQ5VZV1 264 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 NPSR1Q6W5P4 371 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 ZFP2Q6ZN57 461 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 Q6ZVH6 145 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 MRPL55Q7Z7F7 128 aaKnown RBP3.47□□□□□ -1.85
CCDC50-203ENST00000460064 JAGN1Q8N5M9 183 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 FAM86B1Q8N7N1 296 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 CT45A3Q8NHU0 189 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 LRRC29Q8WV35 223 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 TOP1MTQ969P6 601 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 TMEM230Q96A57 120 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 TM4SF18Q96CE8 201 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 TRNT1Q96Q11 434 aaKnown RBP3.47□□□□□ -1.85
CCDC50-203ENST00000460064 ALS2CR12Q96Q35 445 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 OR2A5Q96R48 311 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 ACBD6Q9BR61 282 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 CHAC1Q9BUX1 264 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 BLZF1Q9H2G9 400 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 RGCCQ9H4X1 137 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 UCK1Q9HA47 277 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 MRM3Q9HC36 420 aaKnown RBP3.47□□□□□ -1.85
CCDC50-203ENST00000460064 MRPS30Q9NP92 439 aaKnown RBP3.47□□□□□ -1.85
CCDC50-203ENST00000460064 EMC3Q9P0I2 261 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 CTSFQ9UBX1 484 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 HMGXB4Q9UGU5 601 aa3.47□□□□□ -1.85
CCDC50-203ENST00000460064 TET2Q6N021 2002 aaPredicted RBP3.47□□□□□ -1.85
CCDC50-203ENST00000460064 LRP4O75096 1905 aa3.46□□□□□ -1.85
CCDC50-203ENST00000460064 IGLV1-36A0A0B4J1U3 117 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 A0A1W2PP18 115 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 POLR1CO15160 346 aaPredicted RBP3.46□□□□□ -1.86
CCDC50-203ENST00000460064 ENTPD5O75356 428 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 CDK14O94921 469 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 APOA1P02647 267 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 BCHEP06276 602 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 STAG3L2P0CL84 134 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 MAGP20916 626 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 PPOXP50336 477 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 KRTAP12-2P59991 146 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms