RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 COPS4Q9BT78 406 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 C1QTNF5Q9BXJ0 243 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 TOR3AQ9H497 397 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 GSX1Q9H4S2 264 aaPredicted RBP13.8□□□□□ -0.2
CD28-203ENST00000458610 MED20Q9H944 212 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 MARCH7Q9H992 704 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 PNRC2Q9NPJ4 139 aaKnown RBP13.8□□□□□ -0.2
CD28-203ENST00000458610 CENPMQ9NSP4 180 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 DDX28Q9NUL7 540 aaKnown RBP13.8□□□□□ -0.2
CD28-203ENST00000458610 PURGQ9UJV8 347 aaKnown RBP13.8□□□□□ -0.2
CD28-203ENST00000458610 OAZ3Q9UMX2 235 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 VWC2LB2RUY7 222 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 ZNF878C9JN71 531 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 M0R135 149 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 LY6G6DO95868 133 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 ADH4P08319 380 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 ACHEP22303 614 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 TNFSF4P23510 183 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 NR4A2P43354 598 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 MMP15P51511 669 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 GRB2P62993 217 aaKnown RBP13.79□□□□□ -0.2
CD28-203ENST00000458610 DBPQ10586 325 aaPredicted RBP13.79□□□□□ -0.2
CD28-203ENST00000458610 EIF2B1Q14232 305 aaKnown RBP13.79□□□□□ -0.2
CD28-203ENST00000458610 SLX4IPQ5VYV7 408 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 DRAM2Q6UX65 266 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 FBXW12Q6X9E4 464 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 SLAMF6Q96DU3 332 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 ZNF799Q96GE5 643 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 KCNJ15Q99712 375 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 CHODLQ9H9P2 273 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 RTTNQ86VV8 2226 aa13.79□□□□□ -0.2
CD28-203ENST00000458610 SAC3D1A6NKF1 404 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 SPRY3O43610 288 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 MITFO75030 526 aaPredicted RBP13.78□□□□□ -0.2
CD28-203ENST00000458610 HPXP02790 462 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 SLC6A9P48067 706 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 CCL8P80075 99 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 RSPO1Q2MKA7 263 aaPredicted RBP13.78□□□□□ -0.2
CD28-203ENST00000458610 LYPD4Q6UWN0 246 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 DPY19L4Q7Z388 723 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.78□□□□□ -0.2
CD28-203ENST00000458610 STMN2Q93045 179 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 ZMYND19Q96E35 227 aaPredicted RBP13.78□□□□□ -0.2
CD28-203ENST00000458610 ELMOD3Q96FG2 381 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 ZNF582Q96NG8 517 aaPredicted RBP13.78□□□□□ -0.2
CD28-203ENST00000458610 CIB1Q99828 191 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 SMR3AQ99954 134 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 PKP2Q99959 881 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 S100A14Q9HCY8 104 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 PTTG3PQ9NZH4 202 aa13.78□□□□□ -0.2
CD28-203ENST00000458610 ZAR1LA6NP61 321 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 H3BNX3 289 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 TLX2O43763 284 aaPredicted RBP13.77□□□□□ -0.21
CD28-203ENST00000458610 HSD11B1P28845 292 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 RPS27P42677 84 aaKnown RBP13.77□□□□□ -0.21
CD28-203ENST00000458610 CRYBB2P43320 205 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 MAGEB1P43366 347 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 CHN2P52757 468 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 RAD23AP54725 363 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 PPP2R2BQ00005 443 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 CDK5R2Q13319 367 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 GGTLC2Q14390 218 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 TSTQ16762 297 aaKnown RBP13.77□□□□□ -0.21
CD28-203ENST00000458610 HFEQ30201 348 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 TIGD4Q8IY51 512 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 OR10S1Q8NGN2 331 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 ST7LQ8TDW4 575 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 THEM6Q8WUY1 208 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 TEAD3Q99594 435 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 ABHD6Q9BV23 337 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 SAP30LQ9HAJ7 183 aa13.77□□□□□ -0.21
CD28-203ENST00000458610 IGHV1-69-2A0A0G2JMI3 117 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 IGHV1-46P01743 117 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 LYNP07948 512 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 CD55P08174 381 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 TNFRSF1AP19438 455 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 COL8A2P25067 703 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 OTX1P32242 354 aaPredicted RBP13.76□□□□□ -0.21
CD28-203ENST00000458610 GPR6P46095 362 aaPredicted RBP13.76□□□□□ -0.21
CD28-203ENST00000458610 PRKXP51817 358 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 RIPPLY3P57055 190 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 SLC3A1Q07837 685 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 RIN1Q13671 783 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 APOFQ13790 326 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 NXNL2Q5VZ03 156 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 C12orf73Q69YU5 71 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 PGAP1Q75T13 922 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 SLC16A9Q7RTY1 509 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 MRPL21Q7Z2W9 205 aaKnown RBP13.76□□□□□ -0.21
CD28-203ENST00000458610 ZNF283Q8N7M2 679 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 TCEANCQ8N8B7 351 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 MAPK1IP1LQ8NDC0 245 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 OR8G5Q8NG78 346 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 OR13G1Q8NGZ3 307 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 OTOSQ8NHW6 89 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 TMEM163Q8TC26 289 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 RNF133Q8WVZ7 376 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 C9orf16Q9BUW7 83 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 GABARAPL3Q9BY60 117 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 BPESC1Q9GZL8 116 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms