RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 SIRT4Q9Y6E7 314 aaPredicted RBP7.88□□□□□ -1.15
VPS50-207ENST00000458530 DOCK7Q96N67 2140 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 AKAP9Q99996 3911 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 GTF3C1Q12789 2109 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 AHRRA9YTQ3 701 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 CLDN25C9JDP6 229 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 MAGEB4O15481 346 aaPredicted RBP7.87□□□□□ -1.15
VPS50-207ENST00000458530 SC5DO75845 299 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 UCHL1P09936 223 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 GABRA1P14867 456 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 CALRP27797 417 aaKnown RBP7.87□□□□□ -1.15
VPS50-207ENST00000458530 SDC2P34741 201 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 OPRL1P41146 370 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 RPS27P42677 84 aaKnown RBP7.87□□□□□ -1.15
VPS50-207ENST00000458530 PSMA6P60900 246 aaKnown RBP7.87□□□□□ -1.15
VPS50-207ENST00000458530 HNRNPA0Q13151 305 aaKnown RBP7.87□□□□□ -1.15
VPS50-207ENST00000458530 HSD17B12Q53GQ0 312 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 KRTCAP3Q53RY4 240 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 PRR30Q53SZ7 412 aaPredicted RBP7.87□□□□□ -1.15
VPS50-207ENST00000458530 OXLD1Q5BKU9 147 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 ZMAT1Q5H9K5 638 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 FAM27BQ5VT28 67 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 TMEM244Q5VVB8 128 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 TMEM91Q6ZNR0 172 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 CATSPERDQ86XM0 798 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 SIAH3Q8IW03 269 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 WDFY1Q8IWB7 410 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 TSEN15Q8WW01 171 aaKnown RBP7.87□□□□□ -1.15
VPS50-207ENST00000458530 BORCS5Q969J3 196 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 SPTSSAQ969W0 71 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 TRMT61AQ96FX7 289 aaKnown RBP7.87□□□□□ -1.15
VPS50-207ENST00000458530 ALKBH3Q96Q83 286 aaPredicted RBP7.87□□□□□ -1.15
VPS50-207ENST00000458530 FOXB1Q99853 325 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 ZNF416Q9BWM5 594 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 HDHD2Q9H0R4 259 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 RNF167Q9H6Y7 350 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 CALHM2Q9HA72 323 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 CRLF2Q9HC73 371 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 GPR35Q9HC97 309 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 SMURF1Q9HCE7 757 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 PALMDQ9NP74 551 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 EMC7Q9NPA0 242 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 DDX28Q9NUL7 540 aaKnown RBP7.87□□□□□ -1.15
VPS50-207ENST00000458530 TMEM38BQ9NVV0 291 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 CKLFQ9UBR5 152 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 ATPIF1Q9UII2 106 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 ING1Q9UK53 422 aaPredicted RBP7.87□□□□□ -1.15
VPS50-207ENST00000458530 PCNX1Q96RV3 2341 aa7.87□□□□□ -1.15
VPS50-207ENST00000458530 TMEM269A0A1B0GVZ9 245 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 ANKRD61A6NGH8 418 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 OR4C45A6NMZ5 311 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 PRR32B1ATL7 298 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 RPL36A-HNRNPH2H7BZ11 118 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 WDR1O75083 606 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 SS18L1O75177 396 aaPredicted RBP7.86□□□□□ -1.15
VPS50-207ENST00000458530 ZFPL1O95159 310 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 ISG15P05161 165 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 HOXD4P09016 255 aaPredicted RBP7.86□□□□□ -1.15
VPS50-207ENST00000458530 OCM2P0CE71 109 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 PSKH1P11801 424 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 ZNF12P17014 697 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 RAB3BP20337 219 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 ACHEP22303 614 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 AGTR1P30556 359 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 CDAP32320 146 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 TGFBR1P36897 503 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 RPS19P39019 145 aaKnown RBP7.86□□□□□ -1.15
VPS50-207ENST00000458530 PSMD7P51665 324 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 MXD1Q05195 221 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 DCTN2Q13561 401 aaKnown RBP7.86□□□□□ -1.15
VPS50-207ENST00000458530 RAB35Q15286 201 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 C3AR1Q16581 482 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 CEACAM16Q2WEN9 425 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 WDR38Q5JTN6 314 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 SPANXN2Q5MJ10 180 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 DDI2Q5TDH0 399 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 CORO6Q6QEF8 472 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 UNQ9370/PRO34162Q6UXP9 181 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 SPATC1Q76KD6 591 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 FGD2Q7Z6J4 655 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 TUSC5Q8IXB3 177 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 RBMXL3Q8N7X1 1067 aaKnown RBP7.86□□□□□ -1.15
VPS50-207ENST00000458530 CCDC54Q8NEL0 328 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 OR6Q1Q8NGQ2 317 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 NABP1Q96AH0 204 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 ZFP3Q96NJ6 502 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 DERL3Q96Q80 235 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 AMELYQ99218 206 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 ATF6BQ99941 703 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 PDCD1LG2Q9BQ51 273 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 MRI1Q9BV20 369 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 TPK1Q9H3S4 243 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 PLGRKTQ9HBL7 147 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 TCF7L1Q9HCS4 588 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 FRRS1LQ9P0K9 344 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 CLCF1Q9UBD9 225 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 NUFIP1Q9UHK0 495 aaKnown RBP7.86□□□□□ -1.15
VPS50-207ENST00000458530 OR52A1Q9UKL2 312 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 HHLA2Q9UM44 414 aa7.86□□□□□ -1.15
VPS50-207ENST00000458530 SPG11Q96JI7 2443 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms