RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 PHOSPHO2Q8TCD6 241 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 NUP210Q8TEM1 1887 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-204ENST00000455883 MMABQ96EY8 250 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-204ENST00000455883 PIK3IP1Q96FE7 263 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 TMED7Q9Y3B3 224 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 KLF8O95600 359 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-204ENST00000455883 RPL12P30050 165 aaKnown RBP4.78□□□□□ -1.64
CSMD3-204ENST00000455883 HOXA6P31267 233 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 DPTQ07507 201 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 ELAVL1Q15717 326 aaKnown RBP4.78□□□□□ -1.64
CSMD3-204ENST00000455883 RNASE12Q5GAN4 147 aaKnown RBP4.78□□□□□ -1.64
CSMD3-204ENST00000455883 LYPD4Q6UWN0 246 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 CFAP77Q6ZQR2 320 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 SH3RF2Q8TEC5 729 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 LRRC15Q8TF66 581 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 TAAR6Q96RI8 345 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 P2RX4Q99571 388 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 C2orf16Q68DN1 1984 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 FNDC1Q4ZHG4 1894 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-204ENST00000455883 A0A1B0GVT2 93 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 GSTZ1O43708 216 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-204ENST00000455883 CLDN1O95832 211 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 T-ENOLP0DO92 83 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 RHOBP62745 196 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM236Q5W0B7 351 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 WDTC1Q8N5D0 677 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 DCBLD2Q96PD2 775 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 CPPED1Q9BRF8 314 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-204ENST00000455883 C11orf54Q9H0W9 315 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-204ENST00000455883 OCEL1Q9H607 264 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 RIPK3Q9Y572 518 aa4.78□□□□□ -1.64
CSMD3-204ENST00000455883 IGKV6-21A0A0C4DH24 114 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CDRT15L2A8MXV6 281 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ARPC3O15145 178 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CLDN7O95471 211 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 DEFB134Q4QY38 66 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SYT14P1Q58G82 188 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 AADACL3Q5VUY0 350 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 OR7E24Q6IFN5 339 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CFAP52Q8N1V2 620 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 KRTCAP2Q8N6L1 136 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 OR52R1Q8NGF1 315 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 OR1L6Q8NGR2 347 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ESAMQ96AP7 390 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CHODLQ9H9P2 273 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 NHSL1Q5SYE7 1610 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 TRAPPC6AO75865 159 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 GABREP78334 506 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SIX1Q15475 284 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 OR4C16Q8NGL9 310 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 GHSRQ92847 366 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 OPALINQ96PE5 141 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 TBX5Q99593 518 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 C16orf70Q9BSU1 422 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 A0A0B4J2A0 478 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 B4E171 279 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 M0QYG6 137 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SLC16A7O60669 478 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CH25HO95992 272 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CST3P01034 146 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 FPR2P25090 351 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 HIST3H3Q16695 136 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 NKPD1Q17RQ9 610 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 HNRNPA1L2Q32P51 320 aaKnown RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 DOLPP1Q86YN1 238 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 OR2AK2Q8NG84 335 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 OR2A1Q8NGT9 310 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SLC38A5Q8WUX1 472 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 TAAR9Q96RI9 348 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SRRQ9GZT4 340 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 FBRSL1Q9HCM7 1045 aaKnown RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SHPKQ9UHJ6 478 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 TIMM13Q9Y5L4 95 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 PRAMEF27A3QJZ7 478 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 PRAMEF25A6NGN4 478 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF732B4DXR9 585 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 RRP8O43159 456 aaKnown RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 PRAMEF4O60810 478 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CBR3O75828 277 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 NRASP01111 189 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 KRASP01116 189 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 HLA-DQA1P01909 254 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CRYABP02511 175 aaKnown RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 COX6CP09669 75 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CDKN1CP49918 316 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 HSF1Q00613 529 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 DUSP8Q13202 625 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 GSG1Q2KHT4 349 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF789Q5FWF6 425 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SFRP5Q5T4F7 317 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 PRAMEF9Q5VWM5 478 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 LHX4Q969G2 390 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 TCAPO15273 167 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 OC90Q02509 493 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ACVR1Q04771 509 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SKP2Q13309 424 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SLC9A3R2Q15599 337 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 RAET1LQ5VY80 246 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 OGFOD3Q6PK18 319 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CADM3Q8N126 398 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms