RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 PRKCDQ05655 676 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 KCNMB1Q16558 191 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 GPR139Q6DWJ6 353 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 OR2T2Q6IF00 324 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 ADCK1Q86TW2 530 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 CALHM3Q86XJ0 350 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 OFCC1Q8IZS5 231 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 OR5AS1Q8N127 324 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 GALNT4Q8N4A0 578 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 GJC3Q8NFK1 279 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 OR51A7Q8NH64 312 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 NPRL2Q8WTW4 380 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 ECSITQ9BQ95 431 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 EFCAB9A8MZ26 197 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 F5H5P2 479 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 ZNF205O95201 554 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 SCG5P05408 212 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 FPR3P25089 353 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 RPL4P36578 427 aaKnown RBP11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 FHL1Q13642 323 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 COQ5Q5HYK3 327 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 NANOGP8Q6NSW7 305 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 C1orf94Q6P1W5 598 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 COLCA1Q6ZS62 124 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 NRMQ8IXM6 262 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 LZICQ8WZA0 190 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 ZNF570Q96NI8 536 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 TECTBQ96PL2 329 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 TBX15Q96SF7 602 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 SIKE1Q9BRV8 207 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 TNFRSF19Q9NS68 423 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 PTTG3PQ9NZH4 202 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 A4GNTQ9UNA3 340 aa11.85□□□□□ -0.51
LYSMD3-202ENST00000453259 TRAV27A0A087WT01 109 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 BTBD17A6NE02 478 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 C3orf80F5H4A9 247 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 PIP5K1CO60331 668 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 KHDRBS3O75525 346 aaKnown RBP11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 TSPAN9O75954 239 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 ALX3O95076 343 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 PTBP3O95758 552 aaKnown RBP11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 TSPAN15O95858 294 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 SFTPBP07988 381 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 CTLA4P16410 223 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 OR1E2P47887 323 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 RAD23AP54725 363 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 KRTAP10-3P60369 221 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 HIST1H3AP68431 136 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 ECH1Q13011 328 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 TRAM2Q15035 370 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 CCDC92Q53HC0 331 aaPredicted RBP11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 MESTQ5EB52 335 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 KPRPQ5T749 579 aaPredicted RBP11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 HIST2H3PS2Q5TEC6 136 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 METTL21CQ5VZV1 264 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 RUSC1-AS1Q66K80 236 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 C11orf88Q6PI97 169 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 TMPRSS11FQ6ZWK6 438 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 HIST2H3AQ71DI3 136 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 FAM122BQ7Z309 247 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 ACOT11Q8WXI4 607 aaPredicted RBP11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 SIRPDQ9H106 197 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 ANKRD19PQ9H560 264 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 FN3KRPQ9HA64 309 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 NMNAT1Q9HAN9 279 aaPredicted RBP11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 TMBIM4Q9HC24 238 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 RNF7Q9UBF6 113 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 TMEM5Q9Y2B1 443 aa11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 V9GYY5 206 aaPredicted RBP11.84□□□□□ -0.51
LYSMD3-202ENST00000453259 TRAV38-1A0A0B4J264 116 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 H0YL77 283 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 H7C1C5 153 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 LGALS8O00214 317 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 IGHV4-59P01825 116 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 CSF1P09603 554 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 TNFRSF1BP20333 461 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 SDHAP31040 664 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 TGFBR2P37173 567 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 RBMXP38159 391 aaKnown RBP11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 PMELP40967 661 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 LCN6P62502 163 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 SELENOWP63302 87 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 MALLQ13021 153 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 MAB21L1Q13394 359 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 ZBED5Q49AG3 693 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 CYBRD1Q53TN4 286 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 CLEC12AQ5QGZ9 265 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 DHRS7BQ6IAN0 325 aaPredicted RBP11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 DNM1P34Q6PK57 102 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 METAP1DQ6UB28 335 aaPredicted RBP11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 LYPD2Q6UXB3 125 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 SCCPDHQ8NBX0 429 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 BHLHE23Q8NDY6 225 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 SLC7A6Q92536 515 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 GPX7Q96SL4 187 aaPredicted RBP11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 FNDC11Q9BVV2 318 aa11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 MMADHCQ9H3L0 296 aaPredicted RBP11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 VSX1Q9NZR4 365 aaPredicted RBP11.83□□□□□ -0.52
LYSMD3-202ENST00000453259 POLR1DQ9Y2S0 133 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms