RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 SLC16A9Q7RTY1 509 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 GID4Q8IVV7 300 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 TRUB1Q8WWH5 349 aaKnown RBP12.28□□□□□ -0.44
COL3A1-203ENST00000450867 SPTSSAQ969W0 71 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 EME1Q96AY2 570 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 Q96MF0 132 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 RDH12Q96NR8 316 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 MBOAT4Q96T53 435 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 YIPF3Q9GZM5 350 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 POFUT1Q9H488 388 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 TOR3AQ9H497 397 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 DYNLRB1Q9NP97 96 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 MYOZ1Q9NP98 299 aaPredicted RBP12.28□□□□□ -0.44
COL3A1-203ENST00000450867 C8orf4Q9NR00 106 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 NKIRAS2Q9NYR9 191 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 TAAR3PQ9P1P4 343 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 DUSP13Q9UII6 198 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 FZR1Q9UM11 496 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 SLC22A31A6NKX4 558 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 ANKRD65E5RJM6 399 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 M0R135 149 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 SELENOFO60613 162 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 CSF3P09919 207 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 RAC2P15153 192 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 ALOX5APP20292 161 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 OPRL1P41146 370 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 ALDH3B1P43353 468 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 CDC42P60953 191 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 GRB2P62993 217 aaKnown RBP12.27□□□□□ -0.45
COL3A1-203ENST00000450867 EIF2B1Q14232 305 aaKnown RBP12.27□□□□□ -0.45
COL3A1-203ENST00000450867 MAD2L1BPQ15013 274 aaPredicted RBP12.27□□□□□ -0.45
COL3A1-203ENST00000450867 RCN1Q15293 331 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 SPATA46Q5T0L3 261 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 TMEM154Q6P9G4 183 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 DRAM2Q6UX65 266 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 OR5L1Q8NGL2 311 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 HAVCR1Q96D42 359 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 ZNF799Q96GE5 643 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 IL4I1Q96RQ9 567 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 AMELYQ99218 206 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 KCNJ15Q99712 375 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 VRK1Q99986 396 aaPredicted RBP12.27□□□□□ -0.45
COL3A1-203ENST00000450867 CSPG4Q6UVK1 2322 aa12.27□□□□□ -0.45
COL3A1-203ENST00000450867 A0A1W2PPW3 197 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 C17orf100A8MU93 164 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 F5H5K5 113 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 DLGAP1O14490 977 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 CASQ2O14958 399 aaPredicted RBP12.26□□□□□ -0.45
COL3A1-203ENST00000450867 SSX4O60224 188 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 BAG2O95816 211 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 LYNP07948 512 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 ERCC1P07992 297 aaPredicted RBP12.26□□□□□ -0.45
COL3A1-203ENST00000450867 LIPAP38571 399 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 SLC15A1P46059 708 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 RPS7P62081 194 aaKnown RBP12.26□□□□□ -0.45
COL3A1-203ENST00000450867 SNRPGP62308 76 aaKnown RBP12.26□□□□□ -0.45
COL3A1-203ENST00000450867 PSG7Q13046 419 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 TMED1Q13445 227 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 NKPD1Q17RQ9 610 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 PCGF3Q3KNV8 242 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 BCDIN3DQ7Z5W3 292 aaKnown RBP12.26□□□□□ -0.45
COL3A1-203ENST00000450867 ZCCHC24Q8N2G6 241 aaKnown RBP12.26□□□□□ -0.45
COL3A1-203ENST00000450867 PACRGLQ8N7B6 248 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 SNX33Q8WV41 574 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 COX4I2Q96KJ9 171 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 MNTQ99583 582 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 COPS4Q9BT78 406 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 CYSLTR2Q9NS75 346 aa12.26□□□□□ -0.45
COL3A1-203ENST00000450867 WARS2Q9UGM6 360 aaKnown RBP12.26□□□□□ -0.45
COL3A1-203ENST00000450867 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.26□□□□□ -0.45
COL3A1-203ENST00000450867 ABCA1O95477 2261 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 A0A096LNT2 108 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 A0A1B0GWJ7 208 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 NDUFS8O00217 210 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 SLC16A6O15403 523 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 APOC1P02654 83 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 MT-ND5P03915 603 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 CD99P14209 185 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 HTR1FP30939 366 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 NAA10P41227 235 aaPredicted RBP12.25□□□□□ -0.45
COL3A1-203ENST00000450867 ELF3P78545 371 aaPredicted RBP12.25□□□□□ -0.45
COL3A1-203ENST00000450867 MRPS11P82912 194 aaKnown RBP12.25□□□□□ -0.45
COL3A1-203ENST00000450867 DEGS2Q6QHC5 323 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 CLEC2AQ6UVW9 174 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 PRSS45Q7RTY3 260 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 NAA40Q86UY6 237 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 LURAP1LQ8IV03 231 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 ZNF525Q8N782 197 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 FAM81AQ8TBF8 368 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 C10orf105Q8TEF2 133 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 CNN2Q99439 309 aaKnown RBP12.25□□□□□ -0.45
COL3A1-203ENST00000450867 DCLRE1BQ9H816 532 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 NIPAL2Q9H841 368 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 ADGRL4Q9HBW9 690 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 PURGQ9UJV8 347 aaKnown RBP12.25□□□□□ -0.45
COL3A1-203ENST00000450867 KLHDC2Q9Y2U9 406 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 TMEM14AQ9Y6G1 99 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 ABCA2Q9BZC7 2435 aa12.25□□□□□ -0.45
COL3A1-203ENST00000450867 TRIM64A6NGJ6 449 aa12.24□□□□□ -0.45
COL3A1-203ENST00000450867 TRIM64BA6NI03 449 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms