RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 A0A1B0GVI7 797 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 RAF1P04049 648 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 COX6A1P12074 109 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 STK11Q15831 433 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 TMED4Q7Z7H5 227 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 CD163Q86VB7 1156 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 OR1J2Q8NGS2 313 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 ELP5Q8TE02 316 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 LIN37Q96GY3 246 aaPredicted RBP13.13□□□□□ -0.31
SF1-211ENST00000448404 RBP7Q96R05 134 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 MRPL13Q9BYD1 178 aaKnown RBP13.13□□□□□ -0.31
SF1-211ENST00000448404 PBOV1Q9GZY1 135 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 PLEKHA1Q9HB21 404 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 PROK2Q9HC23 129 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 ZC4H2Q9NQZ6 224 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 FAM206AQ9NX38 181 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 CYB5R1Q9UHQ9 305 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 FBXO4Q9UKT5 387 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 ZNF407Q9C0G0 2248 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 IGHV1-45A0A0A0MS14 117 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 TEX46H3BTG2 121 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 PHYHO14832 338 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 DKK1O94907 266 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 CD2P06729 351 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 PGA4P0DJD7 388 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 PGA3P0DJD8 388 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 MAP2K6P52564 334 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 C3orf33Q6P1S2 294 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 YRDCQ86U90 279 aaKnown RBP13.13□□□□□ -0.31
SF1-211ENST00000448404 MISPQ8IVT2 679 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 LHFPL5Q8TAF8 219 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 NUDCD2Q8WVJ2 157 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 OIT3Q8WWZ8 545 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 NICN1Q9BSH3 213 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 CKLFQ9UBR5 152 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 GPN3Q9UHW5 284 aaPredicted RBP13.13□□□□□ -0.31
SF1-211ENST00000448404 H7C417 338 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 SYT7O43581 403 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 MPC2O95563 127 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 PATE4P0C8F1 98 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 ZNF43P17038 809 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 LAP3P28838 519 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 STARP49675 285 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 BTN1A1Q13410 526 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 AANATQ16613 207 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 CD276Q5ZPR3 534 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 FAM166AQ6J272 317 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 FDX2Q6P4F2 183 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 ABHD12BQ7Z5M8 362 aaPredicted RBP13.12□□□□□ -0.31
SF1-211ENST00000448404 TMEM156Q8N614 296 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 CHST4Q8NCG5 386 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 SLC22A8Q8TCC7 542 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 RNF133Q8WVZ7 376 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 MRGPRX4Q96LA9 322 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 C1QTNF6Q9BXI9 259 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 ZNF436Q9C0F3 470 aaPredicted RBP13.12□□□□□ -0.31
SF1-211ENST00000448404 MTFP1Q9UDX5 166 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 ING4Q9UNL4 249 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 B3GALT5Q9Y2C3 310 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 NBEAQ8NFP9 2946 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 KLK3P07288 261 aaPredicted RBP13.12□□□□□ -0.31
SF1-211ENST00000448404 DBHP09172 617 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 TDGF1P13385 188 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 SCGB2B2Q4G0G5 96 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 DCAF12L2Q5VW00 463 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 FTMTQ8N4E7 242 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 ZBTB44Q8NCP5 570 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 NAXEQ8NCW5 288 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 MNTQ99583 582 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 TRAF4Q9BUZ4 470 aaPredicted RBP13.12□□□□□ -0.31
SF1-211ENST00000448404 ETV7Q9Y603 341 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 DCHS1Q96JQ0 3298 aa13.12□□□□□ -0.31
SF1-211ENST00000448404 MEIKINA0A087WXM9 373 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 A6NIZ1 184 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 IGFBP3P17936 291 aaPredicted RBP13.11□□□□□ -0.31
SF1-211ENST00000448404 PRSS3P35030 304 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 RAP1BP61224 184 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 RAP1AP62834 184 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 BAIAP2L2Q6UXY1 529 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 CHMP1BQ7LBR1 199 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 MEIOBQ8N635 442 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 NAT6Q93015 286 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 SEH1LQ96EE3 360 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 BANF2Q9H503 90 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 MAP1BP46821 2468 aaKnown RBP13.11□□□□□ -0.31
SF1-211ENST00000448404 FREM1Q5H8C1 2179 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 MED13Q9UHV7 2174 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 F5H5K5 113 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 TNFSF11O14788 317 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 ZNF208O43345 1280 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 RGS11O94810 467 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 ZNF432O94892 652 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 PNLIPP16233 465 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 ZNF121P58317 390 aaPredicted RBP13.11□□□□□ -0.31
SF1-211ENST00000448404 PMPCAQ10713 525 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 ZP4Q12836 540 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 UNC119Q13432 240 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 FAM57BQ71RH2 274 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 FGD2Q7Z6J4 655 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 FAM219AQ8IW50 185 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms