RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 TNFRSF13CQ96RJ3 184 aa6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 REG4Q9BYZ8 158 aa6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 BCL2L14Q9BZR8 327 aa6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 TRIM15Q9C019 465 aa6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 RAB1BQ9H0U4 201 aa6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 RNF121Q9H920 327 aa6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 NOX3Q9HBY0 568 aa6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 CCNB1IP1Q9NPC3 277 aa6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 NRIP3Q9NQ35 241 aa6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 RHCGQ9UBD6 479 aa6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 ATPIF1Q9UII2 106 aa6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 ZNF346Q9UL40 294 aaKnown RBP6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 TMCC3Q9ULS5 477 aa6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 TMA7Q9Y2S6 64 aaKnown RBP6.66□□□□□ -1.34
SMARCE1-206ENST00000447024 TRAV27A0A087WT01 109 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 TRBV4-1A0A0J9YWV2 114 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 PRSS37A4D1T9 235 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 C12orf71A8MTZ7 269 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 VWC2LB2RUY7 222 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 CDC42EP2O14613 210 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 ARPC3O15145 178 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 SYNGR3O43761 229 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 PIP5K1CO60331 668 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 SEC14L2O76054 403 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 MMP7P09237 267 aaPredicted RBP6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 OSMP13725 252 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 MSR1P21757 451 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 CRABP1P29762 137 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 APLNRP35414 380 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 THBS4P35443 961 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 ACVR1BP36896 505 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 RAD52P43351 418 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 LSM6P62312 80 aaKnown RBP6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 MRPS11P82912 194 aaKnown RBP6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 SPIBQ01892 262 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 HSF2Q03933 536 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 RUNX1T1Q06455 604 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 TRAP1Q12931 704 aaKnown RBP6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 DNAL1Q4LDG9 190 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 LCN8Q6JVE9 175 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 DNM1P34Q6PK57 102 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 SMARCD3Q6STE5 483 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 ARL9Q6T311 187 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 CLEC9AQ6UXN8 241 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 WDFY1Q8IWB7 410 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 RNF148Q8N7C7 305 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 SLC30A7Q8NEW0 376 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 OR13C2Q8NGS9 318 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 HDAC2Q92769 488 aaKnown RBP6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 MRPL24Q96A35 216 aaKnown RBP6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 ASB9Q96DX5 294 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 FBXO17Q96EF6 278 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 RSRC1Q96IZ7 334 aaKnown RBP6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 COG8Q96MW5 612 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 ZNF48Q96MX3 618 aaPredicted RBP6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 ZNF570Q96NI8 536 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 DOK1Q99704 481 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 CDH20Q9HBT6 801 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 UGT2A1Q9Y4X1 527 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 TIMM10BQ9Y5J6 103 aa6.65□□□□□ -1.34
SMARCE1-206ENST00000447024 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.65□□□□□ -1.35
SMARCE1-206ENST00000447024 NF1P21359 2839 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 FN1P02751 2386 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 TEX13CA0A0J9YWL9 993 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 LOC390937A0A1W2PQ73 354 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 TMEM129A0AVI4 362 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 hCG_2039718K7EN88 272 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 TLX2O43763 284 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 SSX4O60224 188 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 MT-ND5P03915 603 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 T-ENOLP0DO92 83 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 ZNF250P15622 560 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 RRM2P31350 389 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 SLC6A6P31641 620 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 GPR4P46093 362 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 GSSP48637 474 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 PDLIM4P50479 330 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 PIGFQ07326 219 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 LOXL1Q08397 574 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 TSPAN31Q12999 210 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 SNTB2Q13425 540 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 KRR1Q13601 381 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 RAB39AQ14964 217 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 FAM98BQ52LJ0 330 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 SUMO4Q6EEV6 95 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 C1orf94Q6P1W5 598 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 TBPL2Q6SJ96 375 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 UGT2A3Q6UWM9 527 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 TRPM8Q7Z2W7 1104 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 JAZF1Q86VZ6 243 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 DHFR2Q86XF0 187 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 FAM86B1Q8N7N1 296 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 BCAS4Q8TDM0 211 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 GNPDA2Q8TDQ7 276 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 C11orf40Q8WZ69 217 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 RPL36ALQ969Q0 106 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 NABP1Q96AH0 204 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 TSPAN32Q96QS1 320 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 SH3GL3Q99963 347 aa6.64□□□□□ -1.35
SMARCE1-206ENST00000447024 ELOVL3Q9HB03 270 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms