RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZMPSTE24O75844 475 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 AIFM1O95831 613 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 FADS2O95864 444 aaKnown RBP3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 RHOCP08134 193 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 CALM1P0DP23 149 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 CALM2P0DP24 149 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 CALM3P0DP25 149 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 GFAPP14136 432 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 FMO3P31513 532 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 BTCP35070 178 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 CSNK1DP48730 415 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 NUTF2P61970 127 aaKnown RBP3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 SLC35B1P78383 322 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 PMS2P3Q13401 168 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 PRR30Q53SZ7 412 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 UBE2UQ5VVX9 321 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 APOBEC3HQ6NTF7 200 aaKnown RBP3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 WDR82Q6UXN9 313 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 MOB1BQ7L9L4 216 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 ABHD12BQ7Z5M8 362 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 HORMAD1Q86X24 394 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 LINC00469Q8N7U9 141 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 NKAPP1Q8N9T2 125 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 CYB561A3Q8NBI2 242 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 OR7G1Q8NGA0 311 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 OR6K6Q8NGW6 343 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 TYMSOSQ8TAI1 123 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 VSIG2Q96IQ7 327 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 P2RX4Q99571 388 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 MICU1Q9BPX6 476 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 APOL2Q9BQE5 337 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 EBF4Q9BQW3 602 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 ULBP2Q9BZM5 246 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 CHRNA10Q9GZZ6 450 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 SRMSQ9H3Y6 488 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 C1orf198Q9H425 327 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 RPF2Q9H7B2 306 aaKnown RBP3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 AIG1Q9NVV5 245 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 NECAP2Q9NVZ3 263 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 EURLQ9NYK6 297 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 SHPKQ9UHJ6 478 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 NXT1Q9UKK6 140 aaKnown RBP3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 TIAM1Q13009 1591 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 CAMSAP2Q08AD1 1489 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 PRXQ9BXM0 1461 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 TROQ12816 1431 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 A6NDN8 102 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 NCBP2LA6PVI3 153 aaKnown RBP3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 NME4O00746 187 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 TNFSF11O14788 317 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 SRP72O76094 671 aaKnown RBP3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 GDF1P27539 372 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 ARR3P36575 388 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 OR2B6P58173 313 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 SEMG2Q02383 582 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 MXD1Q05195 221 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 TIMM50Q3ZCQ8 353 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 FHL5Q5TD97 284 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 RWDD4Q6NW29 188 aaKnown RBP3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 C12orf54Q6X4T0 127 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 MBOAT2Q6ZWT7 520 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 CYP4Z1Q86W10 505 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 THOC6Q86W42 341 aaKnown RBP3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 MDS2Q8NDY4 140 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 OR2AP1Q8NGE2 309 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 FANK1Q8TC84 345 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 GTSF1Q8WW33 167 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 APH1BQ8WW43 257 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 ARPC1AQ92747 370 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 GTF2H4Q92759 462 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 DYNLL2Q96FJ2 89 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 KIR2DL4Q99706 377 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 AGMATQ9BSE5 352 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 MED10Q9BTT4 135 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 POLR2J2Q9GZM3 115 aaKnown RBP3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 HDHD2Q9H0R4 259 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 POLR2J3Q9H1A7 115 aaKnown RBP3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 PTGES2Q9H7Z7 377 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZDHHC11Q9H8X9 412 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 UGT1A7Q9HAW7 530 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 UGT1A8Q9HAW9 530 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 PLGRKTQ9HBL7 147 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 TMEM9BQ9NQ34 198 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 SLC17A7Q9P2U7 560 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 CLCF1Q9UBD9 225 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 Q9UF83 564 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 MTRF1LQ9UGC7 380 aaKnown RBP3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 SLC22A14Q9Y267 594 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 ST3GAL6Q9Y274 331 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 HYOU1Q9Y4L1 999 aa3.28□□□□□ -1.88
HMGB1P48-201ENST00000446155 DISP2A7MBM2 1401 aa3.27□□□□□ -1.89
HMGB1P48-201ENST00000446155 KIAA1107Q9UPP5 1409 aa3.27□□□□□ -1.89
HMGB1P48-201ENST00000446155 TET3O43151 1660 aa3.27□□□□□ -1.89
HMGB1P48-201ENST00000446155 GAKO14976 1311 aa3.27□□□□□ -1.89
HMGB1P48-201ENST00000446155 MAPK8IP3Q9UPT6 1336 aa3.27□□□□□ -1.89
HMGB1P48-201ENST00000446155 UNC13BO14795 1591 aa3.27□□□□□ -1.89
HMGB1P48-201ENST00000446155 MAST1Q9Y2H9 1570 aa3.27□□□□□ -1.89
HMGB1P48-201ENST00000446155 TRAV39A0A0B4J263 110 aa3.27□□□□□ -1.89
HMGB1P48-201ENST00000446155 A0A1B0GVI7 797 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms