RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PCGF3Q3KNV8 242 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 DRAM2Q6UX65 266 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 MEPCEQ7L2J0 689 aaKnown RBP10.11□□□□□ -0.79
HSPG2-206ENST00000439717 SLC16A9Q7RTY1 509 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 GID4Q8IVV7 300 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 OR8J1Q8NGP2 316 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 OTOSQ8NHW6 89 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 RNF133Q8WVZ7 376 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 TRUB1Q8WWH5 349 aaKnown RBP10.11□□□□□ -0.79
HSPG2-206ENST00000439717 ZNF799Q96GE5 643 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 HRASLS5Q96KN8 279 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 KCNJ15Q99712 375 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 RHNO1Q9BSD3 238 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 COPS4Q9BT78 406 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 ABHD6Q9BV23 337 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 YIPF3Q9GZM5 350 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 C8orf4Q9NR00 106 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 CENPMQ9NSP4 180 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 NKIRAS2Q9NYR9 191 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 USF3Q68DE3 2245 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 MAP1AP78559 2803 aaPredicted RBP10.11□□□□□ -0.79
HSPG2-206ENST00000439717 ITPR3Q14573 2671 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 ARFGEF3Q5TH69 2177 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 PLSCR5A0PG75 271 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 C17orf100A8MU93 164 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 ANKRD65E5RJM6 399 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 E9PQ18 207 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 NDUFS8O00217 210 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 SELENOFO60613 162 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 LCATP04180 440 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 LYNP07948 512 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 NAT2P11245 290 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 KITLGP21583 273 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 PDLIM4P50479 330 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 MALLQ13021 153 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 PSG7Q13046 419 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 TNK1Q13470 666 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 RCN1Q15293 331 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 ZMAT1Q5H9K5 638 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 FBXW12Q6X9E4 464 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 LURAP1LQ8IV03 231 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 ZCCHC24Q8N2G6 241 aaKnown RBP10.1□□□□□ -0.79
HSPG2-206ENST00000439717 ZNF525Q8N782 197 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 HAVCR1Q96D42 359 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 CMBLQ96DG6 245 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 IL4I1Q96RQ9 567 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 SLC29A1Q99808 456 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 TPK1Q9H3S4 243 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 POFUT1Q9H488 388 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 SP140LQ9H930 580 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 DLL4Q9NR61 685 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 HAO2Q9NYQ3 351 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 ARID1AO14497 2285 aa10.1□□□□□ -0.79
HSPG2-206ENST00000439717 ZNF469Q96JG9 3925 aaPredicted RBP10.09□□□□□ -0.79
HSPG2-206ENST00000439717 LOC390937A0A1W2PQ73 354 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 TRIM64A6NGJ6 449 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 TRIM64BA6NI03 449 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 M0R129 80 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 TIMM8AO60220 97 aaPredicted RBP10.09□□□□□ -0.79
HSPG2-206ENST00000439717 LY6HO94772 140 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 ADH4P08319 380 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 DAOP14920 347 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 ANPEPP15144 967 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 SELEP16581 610 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 ALOX5APP20292 161 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 HSD11B1P28845 292 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 OPRL1P41146 370 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 NAA10P41227 235 aaPredicted RBP10.09□□□□□ -0.79
HSPG2-206ENST00000439717 ZNF81P51508 661 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 MMP15P51511 669 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 MRPS11P82912 194 aaKnown RBP10.09□□□□□ -0.79
HSPG2-206ENST00000439717 TMED1Q13445 227 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 ALKBH6Q3KRA9 238 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 ZIK1Q3SY52 487 aaPredicted RBP10.09□□□□□ -0.79
HSPG2-206ENST00000439717 TMEM255AQ5JRV8 349 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 FAM209AQ5JX71 171 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 ZNF786Q8N393 782 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 FAM81AQ8TBF8 368 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 UBASH3BQ8TF42 649 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 THEM6Q8WUY1 208 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 FAM168AQ92567 244 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 RFKQ969G6 155 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 C18orf12Q96KH6 178 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 RDH12Q96NR8 316 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 DIRC2Q96SL1 478 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 MBOAT4Q96T53 435 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 CNN2Q99439 309 aaKnown RBP10.09□□□□□ -0.79
HSPG2-206ENST00000439717 MNTQ99583 582 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 IMPAD1Q9NX62 359 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 PTTG3PQ9NZH4 202 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 WARS2Q9UGM6 360 aaKnown RBP10.09□□□□□ -0.79
HSPG2-206ENST00000439717 LAMP5Q9UJQ1 280 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 PURGQ9UJV8 347 aaKnown RBP10.09□□□□□ -0.79
HSPG2-206ENST00000439717 ZDHHC8Q9ULC8 765 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 TMEM14AQ9Y6G1 99 aa10.09□□□□□ -0.79
HSPG2-206ENST00000439717 HIVEP1P15822 2718 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 ERICH4A6NGS2 130 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 H7C1Q1 480 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 H2BFMP0C1H6 154 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 SLC25A16P16260 332 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms