RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 CATSPERDQ86XM0 798 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 RFLNBQ8N5W9 214 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF676Q8N7Q3 588 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 OR2G2Q8NGZ5 317 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 RPS4Y2Q8TD47 263 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 GPR148Q8TDV2 347 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 ST7LQ8TDW4 575 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 ROBO4Q8WZ75 1007 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 BORCS5Q969J3 196 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 APH1AQ96BI3 265 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 SLAMF6Q96DU3 332 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 WDYHV1Q96HA8 205 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 PGLYRP3Q96LB9 341 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 CEP19Q96LK0 163 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF385AQ96PM9 386 aaKnown RBP3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 DIRC2Q96SL1 478 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 MRI1Q9BV20 369 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 RBM24Q9BX46 236 aaKnown RBP3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 ULBP2Q9BZM5 246 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 C6orf62Q9GZU0 229 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 SLCO5A1Q9H2Y9 848 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 TPK1Q9H3S4 243 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 MOB1AQ9H8S9 216 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 SP140LQ9H930 580 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 BCO1Q9HAY6 547 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 GPR35Q9HC97 309 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 POLE4Q9NR33 117 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 SNTG1Q9NSN8 517 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 CKLFQ9UBR5 152 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 PLA2G2DQ9UNK4 145 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 WASF3Q9UPY6 502 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 CAMK2AQ9UQM7 478 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 B3GNT3Q9Y2A9 372 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 NOSIPQ9Y314 301 aaKnown RBP3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 UGT2A1Q9Y4X1 527 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 RNF114Q9Y508 228 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 LHFPL6Q9Y693 200 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 R4GMQ9 66 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 PMF1-BGLAPU3KQ54 211 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 MED12LQ86YW9 2145 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 ITPR1Q14643 2758 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 SVILO95425 2214 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 BOD1L1Q8NFC6 3051 aa3.5□□□□□ -1.85
HMGB1P37-201ENST00000439613 FREM1Q5H8C1 2179 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 PTPRQQ9UMZ3 2332 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ARHGAP21Q5T5U3 1957 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 IGKV1D-43A0A0B4J1Z2 117 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 TRBV5-5A0A0J9YX44 114 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 AHRRA9YTQ3 701 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 PRR32B1ATL7 298 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF587BE7ETH6 402 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 LOC110117498-PIK3R3F6TDL0 507 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 RPL36A-HNRNPH2H7BZ11 118 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 MAGEB4O15481 346 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 RGS5O15539 181 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 SLC19A2O60779 497 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZFPL1O95159 310 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 FARS2O95363 451 aaKnown RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 CD2P06729 351 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 HOXD4P09016 255 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 DBHP09172 617 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 OCM2P0CE71 109 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 UBCP0CG48 685 aaKnown RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF12P17014 697 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 SRMP19623 302 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 KLK2P20151 261 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 RAB3BP20337 219 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ACHEP22303 614 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 PTBP1P26599 531 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 HSD11B1P28845 292 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 CD40LGP29965 261 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 TNFSF8P32971 234 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 PTGER4P35408 488 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 TGFBR1P36897 503 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ETV6P41212 452 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 SELENOPP49908 381 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 CAPZA1P52907 286 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 PPP5CP53041 499 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 TMPRSS3P57727 454 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 NANOS3P60323 173 aaKnown RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ERVFRD-1P60508 538 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 RPS11P62280 158 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 PPP3R1P63098 170 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 MXD1Q05195 221 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 SCRN3Q0VDG4 424 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 DBPQ10586 325 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 HNRNPA0Q13151 305 aaKnown RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 KRTCAP3Q53RY4 240 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 DDI2Q5TDH0 399 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 OR2A2Q6IF42 318 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 C16orf87Q6PH81 154 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 METAP1DQ6UB28 335 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 Q6ZS92 163 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF627Q7L945 461 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 P4HA3Q7Z4N8 544 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 LINC00346Q8IVM7 164 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 WDFY1Q8IWB7 410 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF100Q8IYN0 542 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 PRSS35Q8N3Z0 413 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms