RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 WDFY4Q6ZS81 3184 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 WDFY3Q8IZQ1 3526 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 GPR89AB7ZAQ6 455 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 F8VVB4 439 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 F8VWA3 439 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 ASAH2BP0C7U1 165 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 GPR89BP0CG08 455 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 NME2P22392 152 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 CD80P33681 288 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 PJVKQ0ZLH3 352 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 EEF1A1P5Q5VTE0 462 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 STOML3Q8TAV4 291 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 SLC25A36Q96CQ1 311 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 OR8B4Q96RC9 309 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 PRMT8Q9NR22 394 aaPredicted RBP12.14□□□□□ -0.47
PCNX3-202ENST00000439247 MMP26Q9NRE1 261 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 RPH3AQ9Y2J0 694 aaPredicted RBP12.14□□□□□ -0.47
PCNX3-202ENST00000439247 KLF8O95600 359 aaPredicted RBP12.13□□□□□ -0.47
PCNX3-202ENST00000439247 LPAR6P43657 344 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 EGR3Q06889 387 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 ISXQ2M1V0 245 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 ATG4DQ86TL0 474 aaPredicted RBP12.13□□□□□ -0.47
PCNX3-202ENST00000439247 MISPQ8IVT2 679 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 FRMD1Q8N878 549 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 SLC30A7Q8NEW0 376 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 C16orf52Q8NHV5 167 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 LMF2Q9BU23 707 aaKnown RBP12.13□□□□□ -0.47
PCNX3-202ENST00000439247 RTN4RQ9BZR6 473 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 POLE3Q9NRF9 147 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 MRPL22Q9NWU5 206 aaKnown RBP12.13□□□□□ -0.47
PCNX3-202ENST00000439247 EMC9Q9Y3B6 208 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 TEX13DA0A0J9YY54 714 aaPredicted RBP12.13□□□□□ -0.47
PCNX3-202ENST00000439247 A0A1W2PQF6 199 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 EFCAB7A8K855 629 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 TXNL1O43396 289 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 IFNA4P05014 189 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 MAOAP21397 527 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 ZNF10P21506 573 aaPredicted RBP12.13□□□□□ -0.47
PCNX3-202ENST00000439247 DMRTC1Q5HYR2 192 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 TMEM31Q5JXX7 168 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 ADGRE4PQ86SQ3 457 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 OR2M4Q96R27 311 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 C20orf24Q9BUV8 137 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 FAM60AQ9NP50 221 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 SLC16A7O60669 478 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 LRP3O75074 770 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 RENP00797 406 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 SLC35E2P0CK97 266 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 ABCD3P28288 659 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 Q6ZS52 159 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 PARGQ86W56 976 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 FAM160A2Q8N612 972 aaPredicted RBP12.13□□□□□ -0.47
PCNX3-202ENST00000439247 RNF128Q8TEB7 428 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 EDARADDQ8WWZ3 215 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 AKR1E2Q96JD6 320 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 SPACA5Q96QH8 159 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 MYOZ1Q9NP98 299 aaPredicted RBP12.13□□□□□ -0.47
PCNX3-202ENST00000439247 GHRLQ9UBU3 117 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 TINAGQ9UJW2 476 aa12.13□□□□□ -0.47
PCNX3-202ENST00000439247 IL2RAP01589 272 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 TNFRSF4P43489 277 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 SSBP1Q04837 148 aaKnown RBP12.12□□□□□ -0.47
PCNX3-202ENST00000439247 SMCO1Q147U7 214 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 TOMM34Q15785 309 aaPredicted RBP12.12□□□□□ -0.47
PCNX3-202ENST00000439247 SGCAQ16586 387 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 ALG11Q2TAA5 492 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 PRR22Q8IZ63 422 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 KDM8Q8N371 416 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 OR13C3Q8NGS6 347 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 Q9N2J8 555 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 LPAR3Q9UBY5 353 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 MIOXQ9UGB7 285 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 SLC5A6Q9Y289 635 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 PRAMEF26H0Y7S4 382 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 RNASEK-C17orf49H0YIS7 233 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 RAB27BO00194 218 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 FBXO24O75426 580 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 CPT2P23786 658 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 TACR3P29371 465 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 FABP9Q0Z7S8 132 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 ECH1Q13011 328 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 EIF2S3LQ2VIR3 472 aaKnown RBP12.12□□□□□ -0.47
PCNX3-202ENST00000439247 ZNF679Q8IYX0 411 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 ZNF321PQ8N8H1 164 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 OR6S1Q8NH40 331 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 ZNF775Q96BV0 537 aaPredicted RBP12.12□□□□□ -0.47
PCNX3-202ENST00000439247 NECAB3Q96P71 396 aaPredicted RBP12.12□□□□□ -0.47
PCNX3-202ENST00000439247 PRRT1Q99946 306 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 PLA2G2EQ9NZK7 142 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 CKLFQ9UBR5 152 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 GDF2Q9UK05 429 aaPredicted RBP12.12□□□□□ -0.47
PCNX3-202ENST00000439247 CA14Q9ULX7 337 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 LRP12Q9Y561 859 aa12.12□□□□□ -0.47
PCNX3-202ENST00000439247 CTLA4P16410 223 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 NTSR1P30989 418 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 DNASE1L1P49184 302 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 NPY4RP50391 375 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 ZP2Q05996 745 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 EBPQ15125 230 aaKnown RBP12.11□□□□□ -0.47
PCNX3-202ENST00000439247 ZNF260Q3ZCT1 412 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms