RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 KLHL40Q2TBA0 621 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 TPTE2P1Q5T6R2 138 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 OR52W1Q6IF63 320 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 MRPL55Q7Z7F7 128 aaKnown RBP4.04□□□□□ -1.76
USP54-206ENST00000433394 OR10G4Q8NGN3 311 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 APH1BQ8WW43 257 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 CYYR1Q96J86 154 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 C9orf72Q96LT7 481 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 OPALINQ96PE5 141 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 FANCEQ9HB96 536 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 RETNQ9HD89 108 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 ZNHIT6Q9NWK9 470 aaKnown RBP4.04□□□□□ -1.76
USP54-206ENST00000433394 TP53TG5Q9Y2B4 290 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 MRPS18BQ9Y676 258 aaKnown RBP4.04□□□□□ -1.76
USP54-206ENST00000433394 TULP4Q9NRJ4 1543 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 MAP3K15Q6ZN16 1313 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 FAM25EA8MYX2 175 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 SMKR1H3BMG3 65 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 RAD51CO43502 376 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 GABARAPO95166 117 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 HBE1P02100 147 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 GGT1P19440 569 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 MSR1P21757 451 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 GPX4P36969 197 aaPredicted RBP4.03□□□□□ -1.76
USP54-206ENST00000433394 CDKN2BP42772 138 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 SLC1A2P43004 574 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 CRISP1P54107 249 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 RAB11AP62491 216 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 ARG2P78540 354 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 SPAG1Q07617 926 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 ERCC8Q13216 396 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 RAB11BQ15907 218 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 CBR4Q8N4T8 237 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 INO80EQ8NBZ0 244 aaPredicted RBP4.03□□□□□ -1.76
USP54-206ENST00000433394 NUBPLQ8TB37 319 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 TMEM158Q8WZ71 300 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 SEH1LQ96EE3 360 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 RNF185Q96GF1 192 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 BMFQ96LC9 184 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 LYRM4Q9HD34 91 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 CTSFQ9UBX1 484 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 ZNF282Q9UDV7 671 aaPredicted RBP4.03□□□□□ -1.76
USP54-206ENST00000433394 F11RQ9Y624 299 aaKnown RBP4.03□□□□□ -1.76
USP54-206ENST00000433394 LRRC7Q96NW7 1537 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 ANKRD26Q9UPS8 1709 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 ADAMTS9Q9P2N4 1935 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 TOPAZ1Q8N9V7 1692 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 EDC4Q6P2E9 1401 aaKnown RBP4.03□□□□□ -1.76
USP54-206ENST00000433394 ADGRL3Q9HAR2 1447 aa4.03□□□□□ -1.76
USP54-206ENST00000433394 TDRD6O60522 2096 aaKnown RBP4.02□□□□□ -1.77
USP54-206ENST00000433394 CARMIL3Q8ND23 1372 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 FMN2Q9NZ56 1722 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 IGHV3-64DA0A0J9YX35 117 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 OR6C74A6NCV1 312 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 SS18L1O75177 396 aaPredicted RBP4.02□□□□□ -1.77
USP54-206ENST00000433394 RDH16O75452 317 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 FCN3O75636 299 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 HLA-DPB1P04440 258 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 IFNW1P05000 195 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 CLTAP09496 248 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 DUX4L4P0CJ87 422 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 OR5H8P0DN80 308 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 CEACAM3P40198 252 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 RPS10P46783 165 aaKnown RBP4.02□□□□□ -1.77
USP54-206ENST00000433394 LHX2P50458 406 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 DMTNQ08495 405 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 ART3Q13508 389 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 VTCN1Q7Z7D3 282 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 PCP2Q8IVA1 136 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 ANKRD60Q9BZ19 345 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 SLC7A5P2Q9GIP4 190 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 RGCCQ9H4X1 137 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 TMEM9BQ9NQ34 198 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 ZNF331Q9NQX6 463 aaPredicted RBP4.02□□□□□ -1.77
USP54-206ENST00000433394 PEF1Q9UBV8 284 aaKnown RBP4.02□□□□□ -1.77
USP54-206ENST00000433394 ST3GAL6Q9Y274 331 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 KIF1AQ12756 1690 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 CPSF1Q10570 1443 aaKnown RBP4.02□□□□□ -1.77
USP54-206ENST00000433394 AKAP12Q02952 1782 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 POLR3AO14802 1390 aaPredicted RBP4.02□□□□□ -1.77
USP54-206ENST00000433394 KIF24Q5T7B8 1368 aa4.02□□□□□ -1.77
USP54-206ENST00000433394 MON2Q7Z3U7 1717 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 TTC21AQ8NDW8 1320 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 A0A1B0GW55 424 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 CYSRT1A8MQ03 144 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 INS-IGF2F8WCM5 200 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 TRDMT1O14717 391 aaKnown RBP4.01□□□□□ -1.77
USP54-206ENST00000433394 SPAG7O75391 227 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 GNAO1P09471 354 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 DUX4L2P0CJ85 424 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 DUX4L3P0CJ86 424 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 DUX4L5P0CJ88 424 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 DUX4L6P0CJ89 424 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 DUX4L7P0CJ90 424 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 PRKACAP17612 351 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 OR1E1P30953 314 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 LONP1P36776 959 aaKnown RBP4.01□□□□□ -1.77
USP54-206ENST00000433394 CLDN8P56748 225 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 CLDN18P56856 261 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 ILKQ13418 452 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms