RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 IMPA2O14732 288 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 GMDSO60547 372 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 KHDRBS3O75525 346 aaKnown RBP6.91□□□□□ -1.3
CDH13-203ENST00000431540 OPN1SWP03999 348 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 IRF2P14316 349 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 RPS2P15880 293 aaKnown RBP6.91□□□□□ -1.3
CDH13-203ENST00000431540 NOS3P29474 1203 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 CRABP1P29762 137 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 KDELR2P33947 212 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 CD200P41217 278 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 RAG2P55895 527 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 GLO1Q04760 184 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 FHL1Q13642 323 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 TRAM2Q15035 370 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 ZBED5Q49AG3 693 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 MIDNQ504T8 468 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 C11orf88Q6PI97 169 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 METAP1DQ6UB28 335 aaPredicted RBP6.91□□□□□ -1.3
CDH13-203ENST00000431540 GDPGP1Q6ZNW5 385 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 RRM2BQ7LG56 351 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 ADCK1Q86TW2 530 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 IGFN1Q86VF2 1251 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 OFCC1Q8IZS5 231 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 BCL6BQ8N143 479 aaPredicted RBP6.91□□□□□ -1.3
CDH13-203ENST00000431540 FITM2Q8N6M3 262 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 CLDN22Q8N7P3 220 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 ATG16L2Q8NAA4 619 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 OR10S1Q8NGN2 331 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 OR11L1Q8NGX0 322 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 OR1F12Q8NHA8 337 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 ACOT11Q8WXI4 607 aaPredicted RBP6.91□□□□□ -1.3
CDH13-203ENST00000431540 LRTOMTQ8WZ04 291 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 NSMAFQ92636 917 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 GTF3AQ92664 365 aaKnown RBP6.91□□□□□ -1.3
CDH13-203ENST00000431540 ITFG2Q969R8 447 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 MEGF10Q96KG7 1140 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 GPX7Q96SL4 187 aaPredicted RBP6.91□□□□□ -1.3
CDH13-203ENST00000431540 NUDT16L1Q9BRJ7 211 aaKnown RBP6.91□□□□□ -1.3
CDH13-203ENST00000431540 TMEM246Q9BRR3 403 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 HCAR1Q9BXC0 346 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 HDHD2Q9H0R4 259 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 DPAGT1Q9H3H5 408 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 C16orf95Q9H693 158 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 GID8Q9NWU2 228 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 VSX1Q9NZR4 365 aaPredicted RBP6.91□□□□□ -1.3
CDH13-203ENST00000431540 ERVK-18Q9QC07 812 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 KAAG1Q9UBP8 84 aa6.91□□□□□ -1.3
CDH13-203ENST00000431540 CAB39Q9Y376 341 aaPredicted RBP6.91□□□□□ -1.3
CDH13-203ENST00000431540 TET2Q6N021 2002 aaPredicted RBP6.9□□□□□ -1.3
CDH13-203ENST00000431540 ZNF879B4DU55 563 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 SLC22A2O15244 555 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 HOXA3O43365 443 aaPredicted RBP6.9□□□□□ -1.3
CDH13-203ENST00000431540 DOK2O60496 412 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 PTP4A3O75365 173 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 TXNDC12O95881 172 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 IFI30P13284 250 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 MDKP21741 143 aaPredicted RBP6.9□□□□□ -1.3
CDH13-203ENST00000431540 HTR5AP47898 357 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 PITPNBP48739 271 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 MTPNP58546 118 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 FMODQ06828 376 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 MAPRE2Q15555 327 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 TAF9Q16594 264 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 FBLN7Q53RD9 439 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 WDR25Q64LD2 544 aaPredicted RBP6.9□□□□□ -1.3
CDH13-203ENST00000431540 DNM1P34Q6PK57 102 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 ZNF841Q6ZN19 808 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 C1orf122Q6ZSJ8 110 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 MBOAT2Q6ZWT7 520 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 SPATC1Q76KD6 591 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 FAM122BQ7Z309 247 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 REC114Q7Z4M0 266 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 LDLRAD3Q86YD5 345 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 PFN4Q8NHR9 129 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 GATAD2BQ8WXI9 593 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 FNDC11Q9BVV2 318 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 C1QTNF5Q9BXJ0 243 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 NRIP3Q9NQ35 241 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 C1RLQ9NZP8 487 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 KCNG2Q9UJ96 466 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 A4GNTQ9UNA3 340 aa6.9□□□□□ -1.3
CDH13-203ENST00000431540 TRAV38-1A0A0B4J264 116 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 A0A1W2PPL8 197 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 EFCAB9A8MZ26 197 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 IDH3BO43837 385 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 TSPAN9O75954 239 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 NDUFB2O95178 105 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 IFNW1P05000 195 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 IGHV4-38-2P0DP08 117 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 SDHAP31040 664 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 SEC61A1P61619 476 aaKnown RBP6.89□□□□□ -1.31
CDH13-203ENST00000431540 COX10Q12887 443 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 SELPLGQ14242 412 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 DEFB112Q30KQ8 113 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 KRTAP27-1Q3LI81 207 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 SLC36A3Q495N2 470 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 CCDC92Q53HC0 331 aaPredicted RBP6.89□□□□□ -1.31
CDH13-203ENST00000431540 CYBRD1Q53TN4 286 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 SPRNQ5BIV9 151 aa6.89□□□□□ -1.31
CDH13-203ENST00000431540 BEND6Q5SZJ8 279 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms