RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 SGK3Q96BR1 496 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 MSI2Q96DH6 328 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 VSTM2LQ96N03 204 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 SPACA1Q9HBV2 294 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 CACNG2Q9Y698 323 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 HSPB2A8KAH6 182 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 MASP2O00187 686 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 OR8U9P0C7N5 309 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 CD226Q15762 336 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 HSPB2Q16082 182 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 CCBE1Q6UXH8 406 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 BHLHA15Q7RTS1 189 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 ASB5Q8WWX0 329 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 SLC26A1Q9H2B4 701 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 ACACAQ13085 2346 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 IFNA7P01567 189 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 DNASE1P24855 282 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 FAM76BQ5HYJ3 339 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 TMEM52Q8NDY8 209 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 OR4A16Q8NH70 328 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 HAS2Q92819 552 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 UBL7Q96S82 380 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 CCDC32Q9BV29 185 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 TTTY12Q9BZ98 90 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 ZCCHC4Q9H5U6 513 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 FOXJ2Q9P0K8 574 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 RCE1Q9Y256 329 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 SCG5P05408 212 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 PABPC1L2AQ5JQF8 200 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 ADGRE4PQ86SQ3 457 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 FN3KRPQ9HA64 309 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 ZFP57Q9NU63 452 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 PRICKLE3O43900 615 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 RNF128Q8TEB7 428 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 A4GNTQ9UNA3 340 aa15.34■□□□□ 0.05
SMARCA4-203ENST00000429416 CRYBA1P05813 215 aa15.33■□□□□ 0.05
SMARCA4-203ENST00000429416 ZNF32P17041 273 aa15.33■□□□□ 0.05
SMARCA4-203ENST00000429416 HOXA1P49639 335 aaPredicted RBP15.33■□□□□ 0.05
SMARCA4-203ENST00000429416 C9orf40Q8IXQ3 194 aa15.33■□□□□ 0.05
SMARCA4-203ENST00000429416 OR4D6Q8NGJ1 314 aa15.33■□□□□ 0.05
SMARCA4-203ENST00000429416 LRFN5Q96NI6 719 aa15.33■□□□□ 0.05
SMARCA4-203ENST00000429416 TXNL4BQ9NX01 149 aaKnown RBP15.33■□□□□ 0.05
SMARCA4-203ENST00000429416 SLCO1B1Q9Y6L6 691 aa15.33■□□□□ 0.05
SMARCA4-203ENST00000429416 APOA2P02652 100 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 EIF4EP06730 217 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 MRM1Q6IN84 353 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 ARL6Q9H0F7 186 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 RAB1BQ9H0U4 201 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 RAB22AQ9UL26 194 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 TIAL1Q01085 375 aaKnown RBP eCLIP15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 PCK2Q16822 640 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 LIN37Q96GY3 246 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 KIRREL1Q96J84 757 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 LRFN3Q9BTN0 628 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 GLRX2Q9NS18 164 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 SLCO1C1Q9NYB5 712 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 GMEB1Q9Y692 573 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 RP1P56715 2156 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 FAHP16930 419 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 FGL1Q08830 312 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 ZNF616Q08AN1 781 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 ZNF774Q6NX45 483 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 LHFPL2Q6ZUX7 228 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 BCL7BQ9BQE9 202 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 ADAT1Q9BUB4 502 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 PLK3Q9H4B4 646 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 C20orf141Q9NUB4 165 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 KIF25Q9UIL4 384 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 R4GMQ9 66 aa15.33■□□□□ 0.04
SMARCA4-203ENST00000429416 COX6B1P14854 86 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 ZNF133P52736 654 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 GNB1P62873 340 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 SLC17A1Q14916 467 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 FAM26EQ8N5C1 309 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 NDUFB3O43676 98 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 ETV1P50549 477 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 GPM6AP51674 278 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 CLVS2Q5SYC1 327 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 SFRP5Q5T4F7 317 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 LOC100289279A0A1B0GTE1 492 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 NAP1L6A6NFF2 107 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 M0R036 132 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 M0R233 179 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 RPL23AP62750 156 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 ZNF141Q15928 474 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 SMIM21Q3B7S5 101 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 SOWAHCQ53LP3 525 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 ABHD3Q8WU67 409 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 MCHR2Q969V1 340 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 ONECUT1Q9UBC0 465 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 CTDSP2O14595 271 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 RER1O15258 196 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 MT-CO2P00403 227 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 IFNA2P01563 188 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 KLF3P57682 345 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 FUT7Q11130 342 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 FXNQ16595 210 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 OR10J5Q8NHC4 309 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 GCM1Q9NP62 436 aa15.32■□□□□ 0.04
SMARCA4-203ENST00000429416 ZNF391Q9UJN7 358 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms