RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 IGHA1P01876 353 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF823P16415 610 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 CRABP1P29762 137 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 TNFSF8P32971 234 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 DEFA1P59665 94 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 DEFA3P59666 94 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 LIPNQ5VXI9 398 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 FBXW9Q5XUX1 488 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 ARL9Q6T311 187 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 YIPF7Q8N8F6 280 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF485Q8NCK3 441 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 IL17RDQ8NFM7 739 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 WDFY2Q96P53 400 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 KCNS3Q9BQ31 491 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 HDHD5Q9BXW7 423 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 EMC3Q9P0I2 261 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF835Q9Y2P0 537 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 EMC9Q9Y3B6 208 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 LRP12Q9Y561 859 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF587BE7ETH6 402 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 GPR171O14626 319 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 FLNBO75369 2602 aaKnown RBP8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 MYL12AP19105 171 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 PTGER4P35408 488 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 RPS25P62851 125 aaKnown RBP8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 ADORA2A-AS1P86434 159 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 PSG4Q00888 419 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 CACNA1DQ01668 2161 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 SLC18B1Q6NT16 456 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 SLC16A9Q7RTY1 509 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF843Q8N446 348 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 OR2AE1Q8NHA4 323 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 SETD6Q8TBK2 473 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 SLAMF6Q96DU3 332 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 CCDC120Q96HB5 630 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 PNRC2Q9NPJ4 139 aaKnown RBP8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 MRPS18AQ9NVS2 196 aaKnown RBP8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 V9GYH0 126 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 USF3Q68DE3 2245 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 IGHV3-64DA0A0J9YX35 117 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 CIB4A0PJX0 185 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF724A8MTY0 619 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 EPXP11678 715 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 EDN3P14138 238 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 PSMA1P25786 263 aaKnown RBP8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 CCKARP32238 428 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 OR3A2P47893 321 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 GALEQ14376 348 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 KLHL22Q53GT1 634 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 SPATA46Q5T0L3 261 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 METAP1DQ6UB28 335 aaPredicted RBP8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 SLC16A14Q7RTX9 510 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF584Q8IVC4 421 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 PRSS35Q8N3Z0 413 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 OR10H5Q8NGA6 315 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 TP63Q9H3D4 680 aaPredicted RBP8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 FGF20Q9NP95 211 aaPredicted RBP8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 PLEK2Q9NYT0 353 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 NPAP1Q9NZP6 1156 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 TBC1D24Q9ULP9 559 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF175Q9Y473 711 aa8.31□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF469Q96JG9 3925 aaPredicted RBP8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 LOC100509620A0A075B734 347 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 IQCMA0A1B0GVH7 501 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 NPIPB13A6NJU9 1138 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 CD8B2A6NJW9 211 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 NPIPB4C9JG80 1138 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 CDK2AP1O14519 115 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 WDR1O75083 606 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 CD8BP10966 210 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 CPEP16870 476 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 MSR1P21757 451 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 RORCP51449 518 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 CAV3P56539 151 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 ERVS71-1P61550 626 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 GGTLC2Q14390 218 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 CCDC92Q53HC0 331 aaPredicted RBP8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 PABPC1L2AQ5JQF8 200 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 STAC2Q6ZMT1 411 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 PHC2Q8IXK0 858 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 GABRG1Q8N1C3 465 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 S100PBPQ96BU1 408 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 CEP19Q96LK0 163 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 EXOSC4Q9NPD3 245 aaKnown RBP8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 PAQR5Q9NXK6 330 aaPredicted RBP8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 FRRS1LQ9P0K9 344 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 MALT1Q9UDY8 824 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 POU2F3Q9UKI9 436 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 FZR1Q9UM11 496 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 RCE1Q9Y256 329 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 MEMO1Q9Y316 297 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 ABHD16AO95870 558 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 NGFP01138 241 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 APOA1P02647 267 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 FCGR2AP12318 317 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 SLC6A9P48067 706 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 WNT4P56705 351 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 SPOCK1Q08629 439 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 MADCAM1Q13477 382 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 SNAI3Q3KNW1 292 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms