RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 STK35Q8TDR2 534 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 WNT2BQ93097 391 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 ADAT3Q96EY9 351 aaPredicted RBP7.45□□□□□ -1.22
CD44-208ENST00000428726 C4orf45Q96LM5 186 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 ALKBH3Q96Q83 286 aaPredicted RBP7.45□□□□□ -1.22
CD44-208ENST00000428726 RBP7Q96R05 134 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 NIPAL2Q9H841 368 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 NOX3Q9HBY0 568 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 SLC39A1Q9NY26 324 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 SEMA5BQ9P283 1151 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 GPN3Q9UHW5 284 aaPredicted RBP7.45□□□□□ -1.22
CD44-208ENST00000428726 ZNF230Q9UIE0 474 aaPredicted RBP7.45□□□□□ -1.22
CD44-208ENST00000428726 ANKRD11Q6UB99 2663 aaPredicted RBP7.45□□□□□ -1.22
CD44-208ENST00000428726 SPTBN4Q9H254 2564 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 COL5A1P20908 1838 aaPredicted RBP7.44□□□□□ -1.22
CD44-208ENST00000428726 KLK3P07288 261 aaPredicted RBP7.44□□□□□ -1.22
CD44-208ENST00000428726 CCR9P51686 369 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 RAB14P61106 215 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 SGCBQ16585 318 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 DHRS13Q6UX07 377 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 LIX1LQ8IVB5 337 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 NFAM1Q8NET5 270 aaPredicted RBP7.44□□□□□ -1.22
CD44-208ENST00000428726 FCAMRQ8WWV6 532 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 FAM3DQ96BQ1 224 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 MED30Q96HR3 178 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 LINC00052Q96N35 136 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 SFXN2Q96NB2 322 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 GPER1Q99527 375 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 MRI1Q9BV20 369 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 TXNIPQ9H3M7 391 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 DLL4Q9NR61 685 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 FOXJ3Q9UPW0 622 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 NUP210LQ5VU65 1888 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 CHD8Q9HCK8 2581 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 IGLV1-36A0A0B4J1U3 117 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 OR6C76A6NM76 312 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 H3BUI4 141 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 AIPO00170 330 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 CTDSPLO15194 276 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 MT-ATP6P00846 226 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 ZNF43P17038 809 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 MAPK3P27361 379 aaPredicted RBP7.44□□□□□ -1.22
CD44-208ENST00000428726 C17orf67Q0P5P2 114 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 SRSF6Q13247 344 aaKnown RBP7.44□□□□□ -1.22
CD44-208ENST00000428726 C4orf46Q504U0 113 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 WIPI1Q5MNZ9 446 aaPredicted RBP7.44□□□□□ -1.22
CD44-208ENST00000428726 PMS2CLQ68D20 193 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 H1FNTQ75WM6 255 aaPredicted RBP7.44□□□□□ -1.22
CD44-208ENST00000428726 RHOUQ7L0Q8 258 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 PRSS42Q7Z5A4 293 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 OR11G2Q8NGC1 345 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 PIGTQ969N2 578 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 NARS2Q96I59 477 aaKnown RBP7.44□□□□□ -1.22
CD44-208ENST00000428726 DCBLD2Q96PD2 775 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 OR8B4Q96RC9 309 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 C7orf50Q9BRJ6 194 aaKnown RBP7.44□□□□□ -1.22
CD44-208ENST00000428726 TRAF4Q9BUZ4 470 aaPredicted RBP7.44□□□□□ -1.22
CD44-208ENST00000428726 HEXA-AS1Q9H8Q6 139 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 COPZ2Q9P299 210 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 PILRBQ9UKJ0 227 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 TMEM14AQ9Y6G1 99 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 FAM166BA8MTA8 275 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 SLC33A1O00400 549 aaPredicted RBP7.44□□□□□ -1.22
CD44-208ENST00000428726 PHYHO14832 338 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 GSTZ1O43708 216 aaPredicted RBP7.44□□□□□ -1.22
CD44-208ENST00000428726 ZFAND5O76080 213 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 UMODP07911 640 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 CELA3AP09093 270 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 HSD11B1P28845 292 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 PTGS2P35354 604 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 ACY1Q03154 408 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 EGR3Q06889 387 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 TMEM65Q6PI78 240 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 ZNF767PQ75MW2 155 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 FOXRED2Q8IWF2 684 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 STPG2Q8N412 459 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 GALNT16Q8N428 558 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 ZNF283Q8N7M2 679 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 OR4C16Q8NGL9 310 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 ASB5Q8WWX0 329 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 ST8SIA2Q92186 375 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 SLAMF6Q96DU3 332 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 ZNF845Q96IR2 970 aaPredicted RBP7.44□□□□□ -1.22
CD44-208ENST00000428726 SELENOIQ9C0D9 397 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 OR52A1Q9UKL2 312 aa7.44□□□□□ -1.22
CD44-208ENST00000428726 COL6A6A6NMZ7 2263 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 A0A096LPE4 126 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 A0A1B0GVI7 797 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 A0A1W2PPZ6 126 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 A0A1W2PR80 420 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 HSPB2A8KAH6 182 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 SDCBPO00560 298 aaPredicted RBP7.43□□□□□ -1.22
CD44-208ENST00000428726 ANGPTL7O43827 346 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 KRT33AO76009 404 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 ZNF432O94892 652 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 HTR3BO95264 441 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 PSMA6P60900 246 aaKnown RBP7.43□□□□□ -1.22
CD44-208ENST00000428726 HSPB2Q16082 182 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 WDR74Q6RFH5 385 aaPredicted RBP7.43□□□□□ -1.22
CD44-208ENST00000428726 ZNF704Q6ZNC4 412 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms