RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 C10orf128Q5T292 105 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 TMEM164Q5U3C3 297 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 RHOUQ7L0Q8 258 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 COMMD2Q86X83 199 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 TMEM123Q8N131 208 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 ADAT3Q96EY9 351 aaPredicted RBP12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 THOC3Q96J01 351 aaKnown RBP12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 SORCS2Q96PQ0 1159 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 GAL3ST1Q99999 423 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF416Q9BWM5 594 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR10A4Q9H209 315 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 PLSCR3Q9NRY6 295 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 A0A1B0GTI1 187 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 H7C417 338 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 PEX14O75381 377 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 RFPL3SP0C7P2 107 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF20P17024 532 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 MSR1P21757 451 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 ERP29P30040 261 aaKnown RBP12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 ST3GAL2Q16842 350 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 C1orf100Q5SVJ3 147 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 CD276Q5ZPR3 534 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 LIX1LQ8IVB5 337 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF283Q8N7M2 679 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 BEST4Q8NFU0 473 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR1M1Q8NGA1 313 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR8B12Q8NGG6 310 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR4D6Q8NGJ1 314 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 KCNE4Q8WWG9 221 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 SLC39A7Q92504 469 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 PNPLA2Q96AD5 504 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 FOXRED1Q96CU9 486 aaPredicted RBP12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 NELFAQ9H3P2 528 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 MYEF2Q9P2K5 600 aaKnown RBP12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 MTFP1Q9UDX5 166 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF222Q9UK12 451 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 MEIS3P1A6NDR6 274 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 RGS13O14921 159 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 ARPC1BO15143 372 aaKnown RBP12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 SMAD9O15198 467 aaKnown RBP12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 TRAPPC6AO75865 159 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 CSF1P09603 554 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 GABRA1P14867 456 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 PRSS3P35030 304 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 GZMKP49863 264 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 SELENOPP49908 381 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 RAC3P60763 192 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 LSM6P62312 80 aaKnown RBP12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 GRB2P62993 217 aaKnown RBP12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 FAPQ12884 760 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF813Q6ZN06 617 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF627Q7L945 461 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 ABHD12BQ7Z5M8 362 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZIC4Q8N9L1 334 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR11H7Q8NGC8 314 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 PSMF1Q92530 271 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 SFXN2Q96NB2 322 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 FAM210AQ96ND0 272 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 DEPPQ9NTK1 212 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 STMN3Q9NZ72 180 aa12.37□□□□□ -0.43
APOBEC3D-202ENST00000427494 WDFY4Q6ZS81 3184 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 LDLRAD4O15165 306 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 DNPH1O43598 174 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 FAUP35544 74 aaKnown RBP12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 VEGFCP49767 419 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF133P52736 654 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 GALK2Q01415 458 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 LINC00303Q3SY05 128 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 WIPI1Q5MNZ9 446 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR10K2Q6IF99 312 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 FAM57BQ71RH2 274 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 GGNQ86UU5 652 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 LYPD6Q86Y78 171 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR52N4Q8NGI2 321 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR5D14Q8NGL3 314 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR13C9Q8NGT0 318 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 NABP1Q96AH0 204 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 TMEM246Q9BRR3 403 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 EDEM2Q9BV94 578 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 RBM24Q9BX46 236 aaKnown RBP12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 CNTD2Q9H8S5 307 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 NOX3Q9HBY0 568 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 TMEM138Q9NPI0 162 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 TAS2R8Q9NYW2 309 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 RHBDD3Q9Y3P4 386 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 PINLYPA6NC86 204 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 DHHO43323 396 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 SSNA1O43805 119 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 RAB3AP20336 220 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 GDF1P27539 372 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 CARD18P57730 90 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 ENDOGQ14249 297 aaKnown RBP12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 DHRS13Q6UX07 377 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 FOXL2NBQ6ZUU3 175 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 FGD2Q7Z6J4 655 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 CDH24Q86UP0 819 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 LRRC18Q8N456 261 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF775Q96BV0 537 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 MS4A3Q96HJ5 214 aa12.36□□□□□ -0.43
APOBEC3D-202ENST00000427494 SF3B5Q9BWJ5 86 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms