RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 CCL2P13500 99 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 RGS6P49758 472 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 KCTD21Q4G0X4 260 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 DRAM2Q6UX65 266 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 C1orf174Q8IYL3 243 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 YIPF7Q8N8F6 280 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 HAVCR2Q8TDQ0 301 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 SLC7A6Q92536 515 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 ZNF799Q96GE5 643 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 SIGLEC11Q96RL6 698 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 TSC22D3Q99576 134 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 SP140LQ9H930 580 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 ERVK-18Q9QC07 812 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 MRM2Q9UI43 246 aaKnown RBP13.35□□□□□ -0.27
COL11A1-204ENST00000427239 GRIP1Q9Y3R0 1128 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 DCHS2Q6V1P9 2916 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 IGHV2OR16-5A0A0B4J2B6 119 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 TMEM129A0AVI4 362 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 DEFB108AA8MXU0 73 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 PRR32B1ATL7 298 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 J3QW42 95 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 PSMD9O00233 223 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 CD3EP07766 207 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 DBHP09172 617 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 COX6B1P14854 86 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 RAD52P43351 418 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 LIPNQ5VXI9 398 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 FAM220AQ7Z4H9 259 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 KLHL36Q8N4N3 616 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 OR52N1Q8NH53 320 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 C4orf45Q96LM5 186 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 CCDC90BQ9GZT6 254 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 TBCCD1Q9NVR7 557 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 GNG8Q9UK08 70 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 CRYBG3Q68DQ2 2970 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 PRR14LQ5THK1 2151 aa13.34□□□□□ -0.27
COL11A1-204ENST00000427239 TRIM64A6NGJ6 449 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 ACOD1A6NK06 481 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 J3QLW9 94 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 ABCD4O14678 606 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 MAGEB4O15481 346 aaPredicted RBP13.33□□□□□ -0.27
COL11A1-204ENST00000427239 ADRA2AP08913 450 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 ACSM4P0C7M7 580 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 ZNF19P17023 458 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 TUBG1P23258 451 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 MMP16P51512 607 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 PRKXP51817 358 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 UCP2P55851 309 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 OR12D2P58182 307 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 MRPL28Q13084 256 aaKnown RBP13.33□□□□□ -0.27
COL11A1-204ENST00000427239 ZNF283Q8N7M2 679 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 NANOGP1Q8N7R0 232 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 ZFAND2BQ8WV99 257 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 SGCDQ92629 289 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 COG8Q96MW5 612 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 C1QTNF5Q9BXJ0 243 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 TTTY10Q9BZA0 68 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 TUBG2Q9NRH3 451 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 CLEC2DQ9UHP7 191 aa13.33□□□□□ -0.27
COL11A1-204ENST00000427239 TMEM269A0A1B0GVZ9 245 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 MYL12BO14950 172 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 ABHD16AO95870 558 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 MT-ND5P03915 603 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 NR4A1P22736 598 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 CALCRP30988 508 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 SLC6A9P48067 706 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 CX3CR1P49238 355 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 ZNF829Q3KNS6 432 aaPredicted RBP13.33□□□□□ -0.28
COL11A1-204ENST00000427239 TP53I3Q53FA7 332 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 SLC22A25Q6T423 547 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 COLCA1Q6ZS62 124 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 PAQR4Q8N4S7 273 aaPredicted RBP13.33□□□□□ -0.28
COL11A1-204ENST00000427239 PIK3IP1Q96FE7 263 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 C4orf36Q96KX1 117 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 DOK1Q99704 481 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 MND1Q9BWT6 205 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 BCL2L14Q9BZR8 327 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 BABAM2Q9NXR7 383 aa13.33□□□□□ -0.28
COL11A1-204ENST00000427239 PLEKHB1Q9UF11 243 aaPredicted RBP13.33□□□□□ -0.28
COL11A1-204ENST00000427239 A6NNC1 897 aa13.32□□□□□ -0.28
COL11A1-204ENST00000427239 SIAH2O43255 324 aa13.32□□□□□ -0.28
COL11A1-204ENST00000427239 PSMA6P60900 246 aaKnown RBP13.32□□□□□ -0.28
COL11A1-204ENST00000427239 IRF3Q14653 427 aa13.32□□□□□ -0.28
COL11A1-204ENST00000427239 OR52H1Q8NGJ2 320 aa13.32□□□□□ -0.28
COL11A1-204ENST00000427239 OR5L1Q8NGL2 311 aa13.32□□□□□ -0.28
COL11A1-204ENST00000427239 APOBEC3DQ96AK3 386 aaPredicted RBP13.32□□□□□ -0.28
COL11A1-204ENST00000427239 TMEM204Q9BSN7 226 aa13.32□□□□□ -0.28
COL11A1-204ENST00000427239 ISG20L2Q9H9L3 353 aaKnown RBP13.32□□□□□ -0.28
COL11A1-204ENST00000427239 RNF115Q9Y4L5 304 aa13.32□□□□□ -0.28
COL11A1-204ENST00000427239 SNX5Q9Y5X3 404 aa13.32□□□□□ -0.28
COL11A1-204ENST00000427239 RTTNQ86VV8 2226 aa13.32□□□□□ -0.28
COL11A1-204ENST00000427239 MT-ND2P03891 347 aa13.31□□□□□ -0.28
COL11A1-204ENST00000427239 LCATP04180 440 aa13.31□□□□□ -0.28
COL11A1-204ENST00000427239 HTR1AP08908 422 aa13.31□□□□□ -0.28
COL11A1-204ENST00000427239 WNT5AP41221 380 aa13.31□□□□□ -0.28
COL11A1-204ENST00000427239 GBX2P52951 348 aaPredicted RBP13.31□□□□□ -0.28
COL11A1-204ENST00000427239 CCDC58Q4VC31 144 aa13.31□□□□□ -0.28
COL11A1-204ENST00000427239 ZNF544Q6NX49 715 aa13.31□□□□□ -0.28
COL11A1-204ENST00000427239 NAA40Q86UY6 237 aa13.31□□□□□ -0.28
COL11A1-204ENST00000427239 NUP37Q8NFH4 326 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms