RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 VDAC3Q9Y277 283 aa4.75□□□□□ -1.65
C9orf3-205ENST00000427193 TMEM5Q9Y2B1 443 aa4.75□□□□□ -1.65
C9orf3-205ENST00000427193 MED31Q9Y3C7 131 aa4.75□□□□□ -1.65
C9orf3-205ENST00000427193 HDGFL3Q9Y3E1 203 aa4.75□□□□□ -1.65
C9orf3-205ENST00000427193 LIPGQ9Y5X9 500 aa4.75□□□□□ -1.65
C9orf3-205ENST00000427193 FREM3P0C091 2139 aa4.75□□□□□ -1.65
C9orf3-205ENST00000427193 MPDZO75970 2070 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 SONP18583 2426 aaKnown RBP4.74□□□□□ -1.65
C9orf3-205ENST00000427193 NCKAP5O14513 1909 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 IGKV3D-15A0A087WSY6 115 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.74□□□□□ -1.65
C9orf3-205ENST00000427193 A0A1W2PNV4 684 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 TRIM64A6NGJ6 449 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 ZNF716A6NP11 495 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 H0YAE9 185 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 H0YC42 278 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 PLPP3O14495 311 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 ARPC3O15145 178 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 DENRO43583 198 aaKnown RBP4.74□□□□□ -1.65
C9orf3-205ENST00000427193 OR2T1O43869 369 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 OR10H3O60404 316 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 E2F6O75461 281 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 OR7A10O76100 309 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 SNAP29O95721 258 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 IGHMP01871 453 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 IGFBP1P08833 259 aaPredicted RBP4.74□□□□□ -1.65
C9orf3-205ENST00000427193 CFC1BP0CG36 223 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 CFC1P0CG37 223 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 TFPIP10646 304 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 IFI30P13284 250 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 ZNF23P17027 643 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 ZNF24P17028 368 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 FUT1P19526 365 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 AGAP20933 346 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 GSTM3P21266 225 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 CXCR1P25024 350 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 IFNA8P32881 189 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 IFNGR2P38484 337 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 RFC3P40938 356 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 ZNF41P51814 821 aaPredicted RBP4.74□□□□□ -1.65
C9orf3-205ENST00000427193 TPD52P55327 224 aaPredicted RBP4.74□□□□□ -1.65
C9orf3-205ENST00000427193 ISL1P61371 349 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 PMP22Q01453 160 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 NPRL3Q12980 569 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 SLC10A1Q14973 349 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 PDK3Q15120 406 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 RFX4Q33E94 735 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 MS4A18Q3C1V0 323 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 FGD3Q5JSP0 725 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 SLX4IPQ5VYV7 408 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 C12orf73Q69YU5 71 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 LAIR2Q6ISS4 152 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 FAM122CQ6P4D5 195 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 PAQR6Q6TCH4 344 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 ZNF730Q6ZMV8 503 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 YRDCQ86U90 279 aaKnown RBP4.74□□□□□ -1.65
C9orf3-205ENST00000427193 WDFY1Q8IWB7 410 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 TMCO5AQ8N6Q1 288 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 ZIC4Q8N9L1 334 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 ICA1LQ8NDH6 482 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 OR5M1Q8NGP8 315 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 ZNF563Q8TA94 476 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 PIGXQ8TBF5 258 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 GNPDA2Q8TDQ7 276 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 FBXO17Q96EF6 278 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 KLHL15Q96M94 604 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 GPR137Q96N19 417 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 TNFRSF13CQ96RJ3 184 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 ZNF184Q99676 751 aaPredicted RBP4.74□□□□□ -1.65
C9orf3-205ENST00000427193 ANKRD60Q9BZ19 345 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 UCK2Q9BZX2 261 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 CTDSP1Q9GZU7 261 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 FAM118AQ9NWS6 357 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 SMPD3Q9NY59 655 aaPredicted RBP4.74□□□□□ -1.65
C9orf3-205ENST00000427193 B4GALT7Q9UBV7 327 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 SEC14L4Q9UDX3 406 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 TMCC3Q9ULS5 477 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 B3GALT5Q9Y2C3 310 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 POFUT2Q9Y2G5 429 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 ZNF835Q9Y2P0 537 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 MMP24Q9Y5R2 645 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 CDH10Q9Y6N8 788 aa4.74□□□□□ -1.65
C9orf3-205ENST00000427193 NCOA6Q14686 2063 aaPredicted RBP4.74□□□□□ -1.65
C9orf3-205ENST00000427193 INTS1Q8N201 2190 aaKnown RBP4.73□□□□□ -1.65
C9orf3-205ENST00000427193 FAM166BA8MTA8 275 aa4.73□□□□□ -1.65
C9orf3-205ENST00000427193 EFCAB9A8MZ26 197 aa4.73□□□□□ -1.65
C9orf3-205ENST00000427193 GNGT2O14610 69 aa4.73□□□□□ -1.65
C9orf3-205ENST00000427193 SMAD9O15198 467 aaKnown RBP4.73□□□□□ -1.65
C9orf3-205ENST00000427193 HSPA12AO43301 675 aa4.73□□□□□ -1.65
C9orf3-205ENST00000427193 TRAF3IP2O43734 574 aaPredicted RBP4.73□□□□□ -1.65
C9orf3-205ENST00000427193 RAMP1O60894 148 aa4.73□□□□□ -1.65
C9orf3-205ENST00000427193 NUDT14O95848 222 aa4.73□□□□□ -1.65
C9orf3-205ENST00000427193 GNAO1P09471 354 aa4.73□□□□□ -1.65
C9orf3-205ENST00000427193 IGFBP5P24593 272 aa4.73□□□□□ -1.65
C9orf3-205ENST00000427193 GDF1P27539 372 aa4.73□□□□□ -1.65
C9orf3-205ENST00000427193 GRPRP30550 384 aa4.73□□□□□ -1.65
C9orf3-205ENST00000427193 GPR4P46093 362 aa4.73□□□□□ -1.65
C9orf3-205ENST00000427193 RPS5P46782 204 aaKnown RBP4.73□□□□□ -1.65
C9orf3-205ENST00000427193 STARP49675 285 aa4.73□□□□□ -1.65
C9orf3-205ENST00000427193 ARHGDIAP52565 204 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms